CX295090

Overview
NameCX295090
Unique NameCX295090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_CAEBR (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Caenorhabditis briggsae GN=tps-1 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 61/216 (28.24%), Postives = 103/216 (47.69%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLT---YESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQ---GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK---PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYII 621
            I+RALL    +GF T      F+   +  +  T   Y+S+     +E+ G   S+ + PV I +    ++   P T  +  E+ KQ   +   G  +   V+  D  KGI+ KL A ++   ++P+  GK VL Q+A   R   +  ++ Q +  +  E INQ F     P + PV+   + L     IA+Y+  +  +VT  +DGMNL+  E ++
Sbjct:  600 IVRALLRFTKVGFQTSRDRETFVKLVADHIKRTKIDYDSRLDRYTIEHDGFACSLGVFPVSIKIADFVNIAKNPQTVIEAEEIRKQIMGKCADGGQLFFSVERFDYTKGIAEKLRAWQRYFEKYPDRIGKDVLFQVAVTNRRSVESYRQYQDDVMALAELINQKFHSEQYPEWKPVIFETDGLPRSRLIAHYLAMDIGVVTPSKDGMNLVAKEMLV 815          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_SALAR (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=otsA PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 55/211 (26.07%), Postives = 107/211 (50.71%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQ--LQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL   S    +T  S + +I    +G+    ++ P+GI   +  LQ+   LP    ++   +K   +     +  V+ +D  KG+  + LA E LL  +P+ +GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  E++ ++
Sbjct:  172 LLEQLCDFDLLGFQTENDRLAFLDSLSSQTRVTTRSGKHHIA---WGKDFQTEVYPIGIEPDEIALQAAGPLPPKLVQLKAELKNVKN-----IFSVERLDYSKGLPERFLAYEALLENYPQHRGKIRYTQIAPTSRGEVQAYQDIRHQLETEAGRINGRYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEFVAAQ 374          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_SALCH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Salmonella choleraesuis GN=otsA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 55/211 (26.07%), Postives = 107/211 (50.71%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQ--LQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL        +T  S + +I    +G+    ++ P+GI   +  LQ+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL  +P+ +GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  E++ ++
Sbjct:  172 LLEQLCDFDLLGFQTENDRLAFLDSLLSQTRVTTRSGKQHIA---WGKDFQTEVYPIGIEPDEIALQAAGPLPPKLAQLKAELKNVKN-----IFSVERLDYSKGLPERFLAYEALLENYPQHRGKIRYTQIAPTSRGEVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEFVAAQ 374          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_KLEP7 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=otsA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 55/211 (26.07%), Postives = 105/211 (49.76%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLS--LPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T      FL   +    L+    + Y   + +G+  S ++ P+GI   ++       LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  FG+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTESDRTAFLDSIAMQTRLSDLGDKRY---QAWGKAFSTEVYPIGIDPDEITRNAKGPLPPKLAQLKNELKNVKN-----IFSVERLDYSKGLPERFLAYETLLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETAAGRINGQFGQLGWTPLYYLNQHFDRKLLMKVFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS2_APHAV (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Aphelenchus avenae GN=tps-2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 61/217 (28.11%), Postives = 97/217 (44.70%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLG---LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKV----MLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK---PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYII 621
            I+R LL    +GF T      F+      L    +TY+ K     + Y G + S+ + PV I       V     T  K  ++ K+   +  V    +L  V+  D  KGI  KLLA  +   +HP+  GK VL Q+A   R      +  Q E     E IN+ F     P + P++   + L+  + +A+Y+  +  +VT  +DGMNL+  E ++
Sbjct:  558 IMRGLLRFTKVGFQTHRDRAKFVELVGIHLPTARVTYDEKMDIHTVTYQGWSCSLGVFPVSIKNEDFLKVAQSAETIKKADDIRKEILGETPVDSARLLFSVERFDYTKGIKEKLLAYRRYFERHPDRIGKDVLYQVAVTNRRSVDTYRMYQDECIQMAEDINKEFATDEYPNWKPLIFRTDGLQRADLVAHYLAMDVGVVTPKKDGMNLVAKEMLV 774          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_APHAV (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aphelenchus avenae GN=tps-1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 61/217 (28.11%), Postives = 97/217 (44.70%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLG---LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKV----MLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK---PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYII 621
            I+R LL    +GF T      F+      L    +TY+ K     + Y G + S+ + PV I       V     T  K  ++ K+   +  V    +L  V+  D  KGI  KLLA  +   +HP+  GK VL Q+A   R      +  Q E     E IN+ F     P + P++   + L+  + +A+Y+  +  +VT  +DGMNL+  E ++
Sbjct:  410 IMRGLLRFTKVGFQTHRDRAKFVELVGIHLPTARVTYDEKMDIHTVTYQGWSCSLGVFPVSIKNEDFLKVAQSAETIKKADDIRKEILGETPVDSARLLFSVERFDYTKGIKEKLLAYRRYFERHPDRIGKDVLYQVAVTNRRSVDTYRMYQDECIQMAEDINREFATDEYPNWKPLIFRTDGLQRADLVAHYLAMDVGVVTPKKDGMNLVAKEMLV 626          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_CITK8 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=otsA PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 52/211 (24.64%), Postives = 105/211 (49.76%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLS--LPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL   S    +T    + +     +G++   ++ P+GI   ++    S  LP   A++   +K   +     +  V+ +D  KG+  +  A E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  E++ ++
Sbjct:  172 LLEQLCDFDLLGFQTENDRLAFLDSLSSQTRVTTRGSKSHSA---WGKSFRTEVYPIGIEPDEIAQQASGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFQAYEALLEKYPQHHGKIRYTQIAPTSRGEVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKVFRYSDVGLVTPLRDGMNLVAKEFVAAQ 374          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS2_CAEEL (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Caenorhabditis elegans GN=tps-2 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 64/235 (27.23%), Postives = 99/235 (42.13%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLG---LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKV----MLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTF---GKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSS 675
            +LR LL    +GF T      ++       G   + Y++K     +   G T S+ + PV I        + LP T    ++L K+               V+  D  KGI  KL A ++   +HP+  GK VL QIA   R      +  Q E     ++IN+ F     P + P+V   + L   E +A Y+  +  +VT  +DGMNL+  E ++    N K   VL +   S
Sbjct:  487 VLRGLLRFTKVGFQTHRDRTKYIELVQHYFGTAKIVYDNKMDIYSITNEGWTCSLGVFPVSIKNDDFLKFVDLPETIKLKNDLRKRVMGDTPAPDGRFFFSVERFDYTKGIMEKLQAYKRYFERHPDRIGKDVLFQIAVTNRRSVDTYRVYQDECIDLADKINEIFKDPNNPTWKPLVFQTDGLPRSELVAAYLAMDIGVVTPKKDGMNLVAKEMLVC---NPKAGLVLSTGAGS 718          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_RHISN (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Rhizobium sp. (strain NGR234) GN=otsA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 52/214 (24.30%), Postives = 98/214 (45.79%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRM-LGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 639
            I+R L + D++GF T     +F SC  R  +G      R    L  YGR     +  +GI             T + V +  +    + + +++GVD +D  KG++ ++ A E+ ++ +P  +G+V  +QI   +R    + + +Q        R+N   G   + P+  I+  +        Y + +  LVT +RDG NL+  EY+ ++  ++
Sbjct:  177 IMRGLSHYDVVGFQTDHDLENFASCLRREGIGDALGGGR----LSAYGRIFKGGVYAIGIETAAFAEFAKKASTNSTVKKARESI--ERRSLIIGVDRLDYSKGLTQRIEAFERFILANPAQRGRVTYLQITPKSRSEVPEYEAMQRTVAEQAGRVNGALGAVDWVPMRYINRSVGRRVLAGLYRLGKVGLVTPLRDGKNLVAKEYVAAQDPDD 384          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_SODGM (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Sodalis glossinidius (strain morsitans) GN=otsA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13
Identity = 55/216 (25.46%), Postives = 104/216 (48.15%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECC---LVTAVRDGMNLIPYEYIISRQGNE 639
            +L  L   DL+GF      + F+     +  +T         ++ Y + V+ ++ P+G+    ++ +   P    K++ L  + + Q   +++ VD +D  KG+  +  A E LL  +P+ +G +   QIA  +RG  +  ++++ E  +   RIN  F    + P+  +++    YER     +   C   LVT +RDGMNL+  EY+ S+  N+
Sbjct:  173 LLEKLCEYDLVGFQAESDRQAFIE---NLALVTTVEDLDDDRIKAYNKLVTARVYPIGVEPESIRELAEGP-LPPKLAHLRDKMNGQ---LIISVDRLDYSKGLPERFQAYETLLENYPQHRGNIRYFQIAPTSRGDVQAYQDIRHELETEAGRINGHFSTLEWTPLFYLNQ---HYERSLLMKIFRHCEVGLVTPLRDGMNLVAKEYVASQNPND 378          
The following BLAST results are available for this feature:
BLAST of CX295090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
TPS1_CAEBR1.487e-1528.24Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_SALAR3.314e-1526.07Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_SALCH5.652e-1526.07Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_KLEP79.642e-1526.07Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS2_APHAV2.148e-1428.11Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS1_APHAV2.148e-1428.11Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_CITK83.664e-1424.64Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS2_CAEEL2.375e-1327.23Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_RHISN3.102e-1324.30Probable alpha,alpha-trehalose-phosphate synthase ... [more]
OTSA_SODGM6.910e-1325.46Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionC05068E02SK DroRLeaf1 Citrus clementina cDNA clone C05068E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295090 ID=CX295090; Name=CX295090; organism=Citrus clementina; type=EST; length=699bp
ATTCTGCGGGCCCTGTTGAATTCTGATTTAATTGGGTTCCATACTTTTGA
TTATGCACGGCATTTCTTGTCCTGCTGTAGTCGAATGCTAGGTCTTACCT
ATGAATCGAAGAGAGGTTACATAGGCCTTGAGTATTATGGTAGGACTGTT
AGTATCAAGATTCTTCCGGTGGGTATTCACATGGGTCAGCTTCAGTCAGT
TTTGAGTCTCCCTGGAACGGAGGCAAAGGTTTCTGAGCTCATTAAGCAGT
TCCATGATCAGGGTAAGGTGATGTTGCTTGGGGTAGATGATATGGACATA
TTTAAGGGCATAAGTTTGAAGCTGTTGGCCATGGAACAGTTACTCATTCA
ACACCCAGAGTGGCAGGGGAAGGTTGTACTGGTGCAGATAGCAAATCCTG
CTAGGGGCCGGGGAAAAGACGTGAAAGAAGTGCAGGCTGAGACATACTCG
ACTGTGGAGCGGATCAATCAAACTTTTGGGAAACCTGGATATGATCCCGT
TGTCTTGATTGATGAGCCACTTAAGTTTTATGAGAGAATTGCATATTATG
TGGTTGCAGAGTGTTGTTTGGTCACTGCAGTTAGAGATGGTATGAATCTC
ATACCATATGAATACATAATCAGCCGCCAAGGAAATGAGAAATTGGACAA
GGTTTTAGGTTCGGAGCCATCATCCCCAAAGAAGAGCATGTTGGTTGTT
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