CX295093

Overview
NameCX295093
Unique NameCX295093
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.377e-47
Identity = 93/228 (40.79%), Postives = 139/228 (60.96%), Query Frame = 2
Query:   20 VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            V  DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L   +    D GIP+D RHM G G +TY + N +G+  +VKFH++   G++ L ++ A ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG
Sbjct:   68 VTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEVAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVG 295          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 99/234 (42.31%), Postives = 136/234 (58.12%), Query Frame = 2
Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRL 709
            G L +  DIS  T A   + PG +TP++ RFSTV  E+G+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD  KFPD IH  K +PK++++    + D+ S  PESL   +    D G+PQ   HM G G +TY   N AG+ ++VKFH+K   G K    +E   V G       + L+ +I  G +P W + +QIM     +K  ++P D+TK WP    P   +G L
Sbjct:   63 GSLKITGDISQYTRAKCLQ-PGAETPMLARFSTVAGEQGAADHERDVRGFALKFYTDEGNWDLVGNNTPVFFIRDPYKFPDFIHTQKRHPKTNLRSATAMWDYWSLSPESLHQVTILMSDRGLPQTPMHMNGYGSHTYSFWNDAGERYWVKFHFKTQQGHKFFTNEEGEAVIGKTREGYQESLFYAIENGEFPRWTVQVQIMPELDVEKTPYNPFDLTKVWPHADYPPVEIGVL 295          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 96/227 (42.29%), Postives = 141/227 (62.11%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRL 709
            D+S  T A +F+ PG +T  ++RFSTV  E GSP+T RD RGFA++FYT EGN+DL+GN+ P+FF+RD +KF   I + K  P S +++     DF ++ PES    ++     G+P+ +R M G G +TY+ +N  G+ H+VK+H+    GV  L  DEA K+ G N     QDL++SIA G++P+W LYIQ +  +    + F+P D+TKT  +   P   VG L
Sbjct:   76 DVSKYTKALVFQ-PGTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTL 301          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATB_STAXY (Catalase B OS=Staphylococcus xylosus GN=katB PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 94/225 (41.78%), Postives = 135/225 (60.00%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  + HA K +P+++++      DF + LPE+L   +    D GIP+ YR+M G G +TY + N  G+  +VKFH +   G++ L  DEA K+   +   + +DL+++I   +YP+WK YIQ+M  +       +P D+TK W +   PL  VG
Sbjct:   70 DITQYTSASIFSEVGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFASLNHAVKRDPRTNMRSAQNNWDFWTSLPEALHQVTILMSDRGIPKGYRNMHGFGSHTYSMYNDKGERVWVKFHHRTQQGIENLQPDEAAKIIADDRESSQRDLFEAIENKDYPKWKTYIQVMTEEQARNHKDNPFDLTKVWYKGDYPLIEVG 294          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 92/225 (40.89%), Postives = 136/225 (60.44%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD   F  +  A K +P+++++      DF + LPE+L   +    D GIP+D RHM G G +TY + N  G+  +VK+H++   G++ L ++EA  V   +   + +DL+++I  G+YP+WK+YIQ+M  +       +P D+TK W     PL  VG
Sbjct:   71 DITQYTSAKMFSEVGKQTEMFARFSTVSGERGAADAERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRSAQNNWDFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENLTDEEAANVIATDRDSSQRDLFNAIENGDYPKWKMYIQVMTEEQARNHKDNPFDLTKVWYHGDYPLIEVG 295          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46
Identity = 92/228 (40.35%), Postives = 137/228 (60.09%), Query Frame = 2
Query:   20 VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            V  DI+  T A +F   G QT +  RFSTV  ERG+ +   D RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L   +    D GIP+D RHM G G +TY + N +G+  +VK H++   G++ L ++EA ++       + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG
Sbjct:   68 VTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAESDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKLHFRTQQGIENLTDEEAAEIIATGRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVG 295          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.839e-46
Identity = 94/235 (40.00%), Postives = 139/235 (59.15%), Query Frame = 2
Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            G+  V  D+S  T A +F   G +TP+I RFS V  E G P+T RD RGFAVKFYT EGN+D++GN+ PVFF+ D +KFPD IH+ K +P++H +      DF S  PES+   +    D GIP  YR M G G +T+  +N  G+  +VK+H+K   G+  L  + A ++ G +  +   DL+D+I  G+YP W + +Q++  +    +  D  DVTK   +   PL  +G++V
Sbjct:   61 GYFKVTKDMSAYTKAAVFSGVGKKTPLITRFSQVAGEAGYPDTYRDVRGFAVKFYTEEGNYDIVGNNTPVFFVNDPLKFPDFIHSQKRDPRTHARSQDMQWDFWSLSPESVHQVTILMSDRGIPASYRMMHGFGSHTFKWVNAQGEQFWVKYHFKTNQGIHNLSNELADELAGKDTDYLQNDLFDAIETGDYPSWTVAVQLVPYEDGLNYPQDIFDVTKVISQKDYPLIEIGQMV 295          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_CANTR (Peroxisomal catalase OS=Candida tropicalis GN=POX9 PE=1 SV=4)

HSP 1 Score: 184.111 bits (466), Expect = 6.320e-46
Identity = 95/226 (42.04%), Postives = 127/226 (56.19%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGR 706
            DI+ +  A      G +T +  RFSTV  E GS +T RDPRGFA KFYT EGN DL+ N+ PVFFIRD  KFP  IH  K NP++H+++     D+ +   ES+      F D G P  YR M G   +TY   N  G+  YV+ H+    G+K L  +EA  + G+N  +A +DL+ +IAAGNYP W  YIQ M      + +F   D+TK WP    P+   G+
Sbjct:   68 DITDVCAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKFYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTTNEESVHQVMVLFSDRGTPASYREMNGYSGHTYKWSNNKGEWFYVQVHFISDQGIKTLTNEEAGSLAGSNPDYAQEDLFKNIAAGNYPSWTCYIQTMTEAQAKEAEFSVFDLTKVWPHGKYPMRRFGK 293          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.254e-46
Identity = 90/225 (40.00%), Postives = 138/225 (61.33%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD   F  +  A K +P+++++      DF + LPE+L   +    D G+P+ +R+M G G +TY + N  G+  +VK+H++   G++   ++EA K+ G +   + +DLY++I  G+YP+WK+YIQ+M  +       +P D+TK W +   PL  VG
Sbjct:   71 DITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNWDFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVG 295          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.254e-46
Identity = 90/225 (40.00%), Postives = 138/225 (61.33%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD   F  +  A K +P+++++      DF + LPE+L   +    D G+P+ +R+M G G +TY + N  G+  +VK+H++   G++   ++EA K+ G +   + +DLY++I  G+YP+WK+YIQ+M  +       +P D+TK W +   PL  VG
Sbjct:   71 DITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNWDFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVG 295          
The following BLAST results are available for this feature:
BLAST of CX295093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_STAAR4.377e-4740.79Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATA_RHIME9.750e-4742.31Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_MICLU9.750e-4742.29Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]
CATB_STAXY1.663e-4641.78Catalase B OS=Staphylococcus xylosus GN=katB PE=3 ... [more]
CATA_STAWA1.663e-4640.89Catalase OS=Staphylococcus warneri GN=katA PE=3 SV... [more]
CATB_STAAA2.172e-4640.35Catalase-like protein OS=Staphylococcus aureus sub... [more]
CATA_LACSK4.839e-4640.00Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
CATA_CANTR6.320e-4642.04Peroxisomal catalase OS=Candida tropicalis GN=POX9... [more]
CATA_STAES8.254e-4640.00Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ8.254e-4640.00Catalase OS=Staphylococcus epidermidis (strain ATC... [more]

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Properties
Property NameValue
Genbank descriptionC05068E05SK DroRLeaf1 Citrus clementina cDNA clone C05068E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295093 ID=CX295093; Name=CX295093; organism=Citrus clementina; type=EST; length=713bp
GTGCTAAGGGTTTCTTTGAGTGCCCCTCGATATTTCTCACCTTACTTGTG
CTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTC
TCCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCG
AGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGG
GTAACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGAT
GTGATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTG
GAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTT
CCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAA
GGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAAGCACA
TTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTTATTGG
AAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTACTCAA
GATCTTTATGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTA
CATCCAGATTATGGATCCCGACCATGAGGACAAATTTGACTTTGACCCAC
TTGATGTAACCAAGACCTGGCCTGAGGACATCTTGCCCCTTGCAACTGTG
GGCCGGTTGGTTT
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