CX295093 | Citrus Genome Database

Overview


Name	CX295093
Unique Name	CX295093
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	713

Libraries


Library Name	Type
DroRLeaf1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.058e-109
Identity = 175/235 (74.47%), Postives = 201/235 (85.53%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF     D++ LTCAD   +PG  TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNPKSH+QEYWR+ DF  H PESL TF + FDDVGIP DYRHM+G GVNTY  + +AGK+HY+KFHW+PTCGV CL++DEA  VGG NHSHATQDLYDSI AGN+PEWKL++Q++DP+ +D+FDFDPLD TKTWPED++PL  VGRLV
Sbjct:   72 GFFECTHDVTGLTCADFLPSPGAGTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLPHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVTRAGKSHYIKFHWRPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIDAGNFPEWKLFVQVIDPEQQDRFDFDPLDDTKTWPEDLVPLQPVGRLV 306

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.058e-109
Identity = 184/235 (78.30%), Postives = 203/235 (86.38%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+DDV +P DYRHMEG GV+ Y LINK GKAHYVKFHWKPTCGVKC+ E+EAI+VGG NHSHAT+DLYDSIAAGNYPEWKL+IQ MDP+  DKFDFDPLDVTKTWPED+LPL  VGRLV
Sbjct:   73 GFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHWKPTCGVKCMSEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQTMDPEDVDKFDFDPLDVTKTWPEDLLPLIPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.382e-109
Identity = 185/235 (78.72%), Postives = 205/235 (87.23%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  D+SHLTCAD  RAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+DDV +P +YRHMEG GV+ Y LINKAGKAHYVKFHWKPTCGVK + E+EAI+VGG NHSHAT+DLYDSIAAGNYPEWKL+IQIMDP+  DKFDFDPLDVTKTWPEDILPL  VGRLV
Sbjct:   73 GFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDVCLPINYRHMEGFGVHAYQLINKAGKAHYVKFHWKPTCGVKSMTEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQIMDPEDVDKFDFDPLDVTKTWPEDILPLMPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.958e-109
Identity = 178/235 (75.74%), Postives = 208/235 (88.51%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  D+S LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+PK+++QE WR++DF SH PESL  F++ FDDVGIP +YRHM+G GVNTY LI++ GKAH VKFHWKPTCGVKCLL+DEA+ VGG  H+HAT+DL DSIAAGNYPEWKL+IQ +D DHED+FDFDPLDVTKTWPEDI+PL  VGR+V
Sbjct:   73 GFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRVVDFFSHHPESLHMFTFLFDDVGIPLNYRHMDGFGVNTYTLISRDGKAHLVKFHWKPTCGVKCLLDDEAVTVGGTCHTHATKDLTDSIAAGNYPEWKLFIQTIDADHEDRFDFDPLDVTKTWPEDIIPLQPVGRMV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.528e-108
Identity = 183/235 (77.87%), Postives = 202/235 (85.96%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+DDV +P DYRHMEG GV+ Y LINK GKAHYVKFHWKPTCGVK + E+EAI+VGG NHSHAT+DLYDSIAAGNYPEWKL+IQ MDP+  DKFDFDPLDVTKTWPED+LPL  VGRLV
Sbjct:   73 GFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHWKPTCGVKSMSEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQTMDPEDVDKFDFDPLDVTKTWPEDLLPLIPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 390.963 bits (1003), Expect = 3.404e-108
Identity = 182/235 (77.45%), Postives = 205/235 (87.23%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DIS+LTCAD  RAPGVQTPVIVRFSTV+HER SPET+RD RGFAVKFYTREGN+DL+GN+ PVFFIRD I+FPDV+HA KPNPK++IQEYWRILD+ SHLPESL T+ W FDDVGIPQDYRHMEG GV+TY LI K+GK  +VKFHWKPTCG+K L ++EA  VGGANHSHAT+DL+D+IA+GNYPEWKL+IQ MDP  EDKFDFDPLDVTK WPEDILPL  VGRLV
Sbjct:   73 GFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAKVVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 7.584e-108
Identity = 177/235 (75.32%), Postives = 207/235 (88.09%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  D+S LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+ K+++QE WR++DF SH PESL  F++ FDDVGIP +YRHM+G GVNTY LI++ GKAH VKFHWKPTCGVKCLL+DEA+ VGG  H+HAT+DL DSIAAGNYPEWKL+IQ +D DHED+FDFDPLDVTKTWPEDI+PL  VGR+V
Sbjct:   73 GFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSSKTNMQENWRVVDFFSHHPESLHMFTFLFDDVGIPLNYRHMDGFGVNTYTLISRDGKAHLVKFHWKPTCGVKCLLDDEAVTVGGTCHTHATKDLTDSIAAGNYPEWKLFIQTIDADHEDRFDFDPLDVTKTWPEDIIPLQPVGRMV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.905e-108
Identity = 177/235 (75.32%), Postives = 207/235 (88.09%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DIS+LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFF+RDA++FPDVI AFKPNPKSH+QE WR LDFCS+ PESL +F+WF+DDVGIP +YRHMEG GV  Y LINK+GKA  VKFHWKPTCGVK ++E+EAI++GG NHSHATQDLY+SIAAGN+PEW+LYIQ +D + ++K+DF+PLD T TWPED++PL  VGRLV
Sbjct:   73 GFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQEPWRYLDFCSYHPESLLSFAWFYDDVGIPINYRHMEGFGVQAYSLINKSGKARLVKFHWKPTCGVKSMMEEEAIRIGGTNHSHATQDLYESIAAGNFPEWRLYIQTIDYEDQNKYDFEPLDTTITWPEDVVPLQPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 3.764e-107
Identity = 180/235 (76.60%), Postives = 199/235 (84.68%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGF VKFY R GN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WR LDF S LPESL TF++F+DDV +P DYRHMEG GV+ Y LINK GKAHYVKFHWKPTCGVKC+ E+EAI+VGG NHSHAT+DLYDSIAAGNYPEWKL+IQ MDP+  DKFDFDPLDVTKTWPED+LPL  VGRLV
Sbjct:   73 GFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFGVKFYNRGGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEDWRTLDFFSFLPESLHTFAFFYDDVCLPTDYRHMEGFGVHAYQLINKEGKAHYVKFHWKPTCGVKCMSEEEAIRVGGTNHSHATKDLYDSIAAGNYPEWKLFIQTMDPEDVDKFDFDPLDVTKTWPEDLLPLIPVGRLV 307

[Close]

BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 2.065e-105
Identity = 174/235 (74.04%), Postives = 204/235 (86.81%), Query Frame = 2

Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  D+S L+CAD  RAPGVQTPVIVRFSTVIHER SPET+RDPRGFAVKFYTREGN+DL+GN+ PVFF+RDA++FPDVI AFKPNPKSH+QE WR LDFCS+ PESL +F+WF+DDVGIP +YRHMEG GV  Y LINKAGKA  VKFHWKPTCGVK +LE+EAI+VGG+NHSHATQDLY+SIAAGN+PEW+LYIQ +D + ++ +DF+PLD T  WPED++PL  VGRLV
Sbjct:   73 GFFEVTHDVSDLSCADFLRAPGVQTPVIVRFSTVIHERVSPETVRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQESWRFLDFCSYHPESLLSFAWFYDDVGIPINYRHMEGFGVQAYSLINKAGKARLVKFHWKPTCGVKSMLEEEAIRVGGSNHSHATQDLYESIAAGNFPEWRLYIQTIDYEDQNNYDFEPLDTTIAWPEDVVPLRPVGRLV 307

The following BLAST results are available for this feature:

BLAST of CX295093 vs. ExPASy Swiss-Prot

BLAST of CX295093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142


Match Name	E-value	Identity	Description
CATA_SECCE	1.058e-109	74.47	Catalase OS=Secale cereale PE=2 SV=1	[more]
CATA1_SOLLC	1.058e-109	78.30	Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1...	[more]
CATA_SOLME	1.382e-109	78.72	Catalase OS=Solanum melongena PE=2 SV=1	[more]
CATA1_HORVU	8.958e-109	75.74	Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2...	[more]
CATA2_SOLTU	1.528e-108	77.87	Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE...	[more]
CATA3_ARATH	3.404e-108	77.45	Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV...	[more]
CATA2_WHEAT	7.584e-108	75.32	Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1	[more]
CATA3_CUCPE	9.905e-108	75.32	Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ...	[more]
CATA1_SOLTU	3.764e-107	76.60	Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE...	[more]
CATA2_CUCPE	2.065e-105	74.04	Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ...	[more]

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Properties


Property Name	Value
Genbank description	C05068E05SK DroRLeaf1 Citrus clementina cDNA clone C05068E05, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX295093 ID=CX295093; Name=CX295093; organism=Citrus clementina; type=EST; length=713bp
GTGCTAAGGGTTTCTTTGAGTGCCCCTCGATATTTCTCACCTTACTTGTG
CTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTC
TCCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCG
AGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGG
GTAACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGAT
GTGATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTG
GAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTT
CCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAA
GGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAAGCACA
TTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTTATTGG
AAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTACTCAA
GATCTTTATGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTA
CATCCAGATTATGGATCCCGACCATGAGGACAAATTTGACTTTGACCCAC
TTGATGTAACCAAGACCTGGCCTGAGGACATCTTGCCCCTTGCAACTGTG
GGCCGGTTGGTTT