CX295093

Overview
NameCX295093
Unique NameCX295093
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 4.984e-59
Identity = 113/235 (48.09%), Postives = 150/235 (63.83%), Query Frame = 2
Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            GF  V  DI+    AD+F   G +TP+ +RFSTV  E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD I FP+ IH  K NP +H+++   + DF S  PE+       F D GIP  +RHM+G G +T+ L+NK G A Y KFH K   G++ L  D AIK+ G +  ++ +DLYDSI  GNYP W+L IQ+M  +    + F+P D+TK W     PL  VG++V
Sbjct:   82 GFFEVTDDITKYCKADVFSTIGKRTPIFIRFSTVGGELGSADTQRDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIFFPNFIHTQKRNPVTHLKDPNMMWDFFSLRPETTHQVMILFGDRGIPDGFRHMDGFGSHTFKLVNKDGNAVYCKFHIKTAQGIRNLPPDVAIKLAGEDPDYSIRDLYDSIENGNYPVWRLMIQVMTFEEAANYRFNPFDITKVWSHKEFPLILVGKIV 316          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.510e-59
Identity = 109/235 (46.38%), Postives = 151/235 (64.26%), Query Frame = 2
Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            G+  V  DI+  + A +F   G  TP++VRFSTV  E GSP+T+RDPRGFAVKFYT EGNWDL GN+ P FFIRD +  P  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  YRHM G G +T+ L+N  G+  Y KFH+K   G+K +  +EA ++   +  ++ +DLY++IA GN+P W  YIQ+M  +  + + ++P D+TK W     PL  VGR V
Sbjct:   83 GYFEVTHDITRYSKAKVFEHVGKTTPIVVRFSTVAGEAGSPDTVRDPRGFAVKFYTDEGNWDLTGNNTPTFFIRDTLLSPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGYRHMNGYGSHTFKLVNAQGQPVYCKFHYKTNQGIKNIPVEEADRLAATDPDYSIRDLYNAIANGNFPSWTFYIQVMTFEQAENWKWNPFDLTKVWSHKEFPLIPVGRFV 317          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATE_PSEAE (Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.502e-59
Identity = 115/235 (48.94%), Postives = 153/235 (65.11%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI-------QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            D+S LT A      G +TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+DL+GN++PVFFI+DAIKFPD +HA KP P + I         +W   DF S  PES     W   D  IP  YR+M+G GV+T+ L+N AG++  VKFHW+P  G   L+ DEA K+ G +     + L++ I  G+YPEW+L +Q++  + +D FDFD LD TK  PE+++P+  VGR+V
Sbjct:  105 DLSDLTKAGFLAEAGKRTPVFVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGASAHDTFW---DFVSLTPESAHMVMWLMSDRAIPIAYRNMQGFGVHTFRLVNAAGESVLVKFHWRPKSGTCSLVWDEAQKLAGKDPDFNRRTLWEDIEKGDYPEWELGLQVIPENQQDSFDFDLLDPTKLVPEELVPVRVVGRMV 336          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_PONAB (Catalase OS=Pongo abelii GN=CAT PE=2 SV=3)

HSP 1 Score: 226.868 bits (577), Expect = 8.502e-59
Identity = 109/235 (46.38%), Postives = 153/235 (65.11%), Query Frame = 2
Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            G+  V  DI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRD + FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G G +T+ L+N  G+A Y KFH+K   G+K L  ++A ++   +  +  +DL+++IA   YP W  YIQ+M  +  + F F+P D+TK WP    PL  VG+LV
Sbjct:   83 GYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPLLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATEKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLV 317          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.110e-58
Identity = 112/230 (48.70%), Postives = 150/230 (65.22%), Query Frame = 2
Query:   20 VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRL 709
            V  DI+  T A LF + G QTP  +RFSTV  ERGS +T RDPRGFA+KFYT EGNWD++GN+ PVFFIRD +KFPD IH  K  P+S+++    + DF SH PE+L   +  F D GIP  YRHM G G +TY LIN  G+ H+VK+H+K   G+K L   +A ++ G +  +A +DL+ +I  G++P+W++ IQIM     +    +P DVTKTW +   PL  VG L
Sbjct:   67 VTQDITQYTSAKLFDSVGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDYAQRDLFGAIERGDFPKWRVCIQIMTEAQANAHYENPFDVTKTWSQKEFPLIEVGEL 296          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.894e-58
Identity = 118/231 (51.08%), Postives = 151/231 (65.37%), Query Frame = 2
Query:   41 LTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI-------QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            LT A   + P   TPV VRFSTV   RGS +T+RD RGFAVKFYT EGN+DL+GN++PVFFI+DAIKFPD +HA KP P + I         +W   DF S +PES     W   D  IP+  R MEG GV+T+ LIN  G A +VKFHWKP  GV  LL DEA K+ G +     +DL+++I  G+YPEW+L +QI+    E KFDFD LD TK  PE+++P+  +G++V
Sbjct:  111 LTKAGFLQDPDKITPVFVRFSTVQGPRGSGDTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFW---DFVSLVPESAHMVMWAMSDRAIPRSLRMMEGFGVHTFRLINAEGVASFVKFHWKPRQGVHSLLWDEAQKLAGKDTDFQRRDLWEAIENGDYPEWELGVQIVPEADEHKFDFDLLDPTKIIPEELVPVTPLGKMV 338          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 225.713 bits (574), Expect = 1.894e-58
Identity = 112/235 (47.66%), Postives = 151/235 (64.26%), Query Frame = 2
Query:    8 GFL*VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            G+  V  D++  T A      G +TP+ +RFSTV  E GS +T+RDPRGFAVKFYT EGN+D++GN+ PVFFIRDAIKFPD IH  K +PK+H++    + DF S  PESL   +    D GIP   RHM G G +T+   N  G+  ++K+H+K   GVK L  + A K+ G N  + T+DL+++I  G+YP WKLY+QIM  +  + + FDP DVTK W +   PL  VGR+V
Sbjct:   62 GYFEVTNDVTKYTKAAFLSEVGKRTPLFIRFSTVAGELGSADTVRDPRGFAVKFYTEEGNYDIVGNNTPVFFIRDAIKFPDFIHTQKRDPKTHLKNPTAVWDFWSLSPESLHQVTILMSDRGIPATLRHMHGFGSHTFKWTNAEGEGVWIKYHFKTEQGVKNLDVNTAAKIAGENPDYHTEDLFNAIENGDYPAWKLYVQIMPLEDANTYRFDPFDVTKVWSQKDYPLIEVGRMV 296          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 7.958e-57
Identity = 109/228 (47.81%), Postives = 149/228 (65.35%), Query Frame = 2
Query:   20 VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            V  DI+  T A +F   G +T    RFSTV  ERGS + +RDPRGFA+K+YT EGNWDL+GN+ PVFFIRDAIKFPD IH  K +P++++  +  + DF S++PESL   +W   D GIP+ +RHM+G G +T+ LIN  G+  +VKFH+    GVK L  +EA +V   +     +DL+++IA G++P+WKL IQ+M  +   K+ F P DVTK W     PL  VG
Sbjct:   68 VTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVG 295          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_STRCO (Catalase OS=Streptomyces coelicolor GN=katA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.039e-56
Identity = 106/228 (46.49%), Postives = 141/228 (61.84%), Query Frame = 2
Query:   29 DISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVGRLV 712
            D+S  T AD     G +T V +RFSTV    G  + +RDPRGFA+KFYT EGN+DL+GN+ PVFFI+D IKFPD IH+ K +P +  QE   + DF +H PE+    +W   D GIP  YRHM+G G +TY   N  G++ +VK+H+K   G++CL  DEA K+ G + +    DL  +I  G YP W L++Q+M       + F+P DVTK WP    PL  VGRLV
Sbjct:   69 DVSGFTHADFLNTVGKRTEVFLRFSTVADSLGGADAVRDPRGFALKFYTEEGNYDLVGNNTPVFFIKDPIKFPDFIHSQKRDPFTGRQEPDNVFDFWAHSPEATHQITWLMGDRGIPASYRHMDGFGSHTYQWTNARGESFFVKYHFKTDQGIRCLTADEAAKLAGEDPTSHQTDLVQAIERGVYPSWTLHVQLMPVAEAANYRFNPFDVTKVWPHADYPLKRVGRLV 296          
BLAST of CX295093 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56
Identity = 108/228 (47.37%), Postives = 149/228 (65.35%), Query Frame = 2
Query:   20 VPLDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLATVG 703
            V  DI+  T A +F   G +T    RFSTV  E+GS + +RDPRGFA+K+YT EGNWDL+GN+ PVFFIRDAIKFPD IH  K +P++++     + DF S++PESL   +W   D GIP+ +RHM+G G +T+ LIN  G+  +VKFH++   GVK L  +EA +V   +     +DL+D+IA G++P+WK+ IQ+M  +   K+ F P DVTK W     PL  VG
Sbjct:   68 VTKDITKYTKAKIFSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNPDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEVRKYDPDSNQRDLFDAIAGGDFPKWKMSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVG 295          
The following BLAST results are available for this feature:
BLAST of CX295093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_ASCSU4.984e-5948.09Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_DANRE6.510e-5946.38Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATE_PSEAE8.502e-5948.94Catalase HPII OS=Pseudomonas aeruginosa GN=katE PE... [more]
CATA_PONAB8.502e-5946.38Catalase OS=Pongo abelii GN=CAT PE=2 SV=3[more]
CATA_ONCVE1.110e-5848.70Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATE_PSEPU1.894e-5851.08Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_BACSU1.894e-5847.66Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_HELPY7.958e-5747.81Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATA_STRCO1.039e-5646.49Catalase OS=Streptomyces coelicolor GN=katA PE=3 S... [more]
CATA_HELPJ1.357e-5647.37Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionC05068E05SK DroRLeaf1 Citrus clementina cDNA clone C05068E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295093 ID=CX295093; Name=CX295093; organism=Citrus clementina; type=EST; length=713bp
GTGCTAAGGGTTTCTTTGAGTGCCCCTCGATATTTCTCACCTTACTTGTG
CTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTC
TCCACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCG
AGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGG
GTAACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGAT
GTGATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTG
GAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTT
CCTGGTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAA
GGATCTGGTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAAGCACA
TTATGTGAAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTTATTGG
AAGATGAGGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTACTCAA
GATCTTTATGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTA
CATCCAGATTATGGATCCCGACCATGAGGACAAATTTGACTTTGACCCAC
TTGATGTAACCAAGACCTGGCCTGAGGACATCTTGCCCCTTGCAACTGTG
GGCCGGTTGGTTT
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