CX295095

Overview
NameCX295095
Unique NameCX295095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_BACC0 (60 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groL PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+                GM+ DRGY SP  +T
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMIT 204          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_BACAN (60 kDa chaperonin OS=Bacillus anthracis GN=groL PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+                GM+ DRGY SP  +T
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMIT 204          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_BACAH (60 kDa chaperonin OS=Bacillus thuringiensis (strain Al Hakam) GN=groL PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+                GM+ DRGY SP  +T
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMIT 204          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_BACAC (60 kDa chaperonin OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=groL PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+                GM+ DRGY SP  +T
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMIT 204          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_BACAA (60 kDa chaperonin OS=Bacillus anthracis (strain A0248) GN=groL PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+                GM+ DRGY SP  +T
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMIT 204          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 107/204 (52.45%), Postives = 147/204 (72.06%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AKDI F + +R AM  G+D L+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV +++G+++ V   +E L++ ++PIEG++ I  VA ISA  D+ +G++IA+A+++VG DGV+                GM+ DRGY SP  VT
Sbjct:    2 AKDIKFSEEARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGMEQAVTVAIENLKEISKPIEGKESIAQVAAISAA-DEEVGSLIAEAMERVGNDGVITIEESKGFTTELEVVEGMQFDRGYASPYMVT 204          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH601_STRCO (60 kDa chaperonin 1 OS=Streptomyces coelicolor GN=groL1 PE=3 SV=3)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 104/204 (50.98%), Postives = 145/204 (71.08%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AK + FD+ +R A++ G++KL+D V +T+GP+GRNVV+D+ FG+P + NDGVTIAR +E+ DP EN GA L++EVA+KTND AGDGTTTA+VLA+ +++ GL +V +GA+P  LK+GID  V  + E+L   ARPI+ + DI AVA +SA  D  +G +IA+A+DKVG DGV+                GM  D+GY+SP FVT
Sbjct:    2 AKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVEVEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGIDAAVAAVSEDLLATARPIDEKSDIAAVAALSA-QDQQVGELIAEAMDKVGKDGVITVEESNTFGLELDFTEGMAFDKGYLSPYFVT 204          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 107/205 (52.20%), Postives = 147/205 (71.71%), Query Frame = 2
Query:   77 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            +AK +AFD  +R A++ G+  ++ AV +TLGP+GRNVVL+ +FGSP +  DGVT+A+ IEL DP EN GA L REVASKTND AGDGTTTA+VLA+ I+  GL +V +GANP+ +K+GID+ V  +V+E++K + P+E ++ I  VA+I+A N+  IG +IADA++KVG DGV+                GME DRGY+SP FVT
Sbjct:    2 AAKQLAFDVEARRALEKGVSTVAQAVKVTLGPKGRNVVLERKFGSPVITKDGVTVAKEIELKDPYENMGAQLCREVASKTNDVAGDGTTTATVLAQAIMLEGLKNVAAGANPIFVKKGIDRAVETVVDEIKKISIPVESKESIAHVASIAA-NEREIGELIADAMEKVGKDGVITVEESKGTATTVEVVEGMEFDRGYVSPYFVT 205          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_PASMU (60 kDa chaperonin OS=Pasteurella multocida GN=groL PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.011e-51
Identity = 103/204 (50.49%), Postives = 142/204 (69.61%), Query Frame = 2
Query:   77 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFV 685
            +AKD+ F   +R  M AG++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +V EL+  ++P E   +I+ V TISA +D ++G +IA A+DKVG +GV+                GM+ DRGY+SP F+
Sbjct:    2 AAKDVKFGNDARVKMLAGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVTAVVTELKALSKPCETSKEIEQVGTISANSDSIVGQIIAQAMDKVGKEGVITVEDGTGLEDELAVVEGMQFDRGYLSPYFI 205          
BLAST of CX295095 vs. ExPASy Swiss-Prot
Match: CH60_LYSSC (60 kDa chaperonin OS=Lysinibacillus sphaericus (strain C3-41) GN=groL PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.011e-51
Identity = 108/204 (52.94%), Postives = 144/204 (70.59%), Query Frame = 2
Query:   80 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVT 688
            AKDI F + +R+ M  G+DKL++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL +P EN GA L+ EVASKTN+ AGDGTTTA+VLA+ II+ GL +VT+GANPV +++GIDK V   + EL   +RP+  +D+I  VA ISA  DD +G +IA+A+++VG DGV+                GM+ DRGY S   VT
Sbjct:    2 AKDIKFSEDARSLMLQGVDKLANAVKITLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELENPYENMGAKLVAEVASKTNEIAGDGTTTATVLAQAIIREGLKNVTAGANPVGIRKGIDKAVAAALTELHTISRPVSNKDEIAQVAAISAA-DDEVGQLIAEAMERVGNDGVITIEESKGFTTELDVVEGMQFDRGYASHYMVT 204          
The following BLAST results are available for this feature:
BLAST of CX295095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BACC07.740e-5252.9460 kDa chaperonin OS=Bacillus cereus (strain AH820... [more]
CH60_BACAN7.740e-5252.9460 kDa chaperonin OS=Bacillus anthracis GN=groL PE... [more]
CH60_BACAH7.740e-5252.9460 kDa chaperonin OS=Bacillus thuringiensis (strai... [more]
CH60_BACAC7.740e-5252.9460 kDa chaperonin OS=Bacillus anthracis (strain CD... [more]
CH60_BACAA7.740e-5252.9460 kDa chaperonin OS=Bacillus anthracis (strain A0... [more]
CH60_BACA27.740e-5252.4560 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]
CH601_STRCO7.740e-5250.9860 kDa chaperonin 1 OS=Streptomyces coelicolor GN=... [more]
CH601_MOOTA7.740e-5252.2060 kDa chaperonin 1 OS=Moorella thermoacetica (str... [more]
CH60_PASMU1.011e-5150.4960 kDa chaperonin OS=Pasteurella multocida GN=groL... [more]
CH60_LYSSC1.011e-5152.9460 kDa chaperonin OS=Lysinibacillus sphaericus (st... [more]

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Properties
Property NameValue
Genbank descriptionC05068E08SK DroRLeaf1 Citrus clementina cDNA clone C05068E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295095 ID=CX295095; Name=CX295095; organism=Citrus clementina; type=EST; length=711bp
GAGGGGGGAGCTTGAGGAGGAGAGGAATCAGAATCAGGGTCAGAGAGTAA
ATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAAAGATATTGCTTTTGAC
CAGATCTCCAGGGCCGCAATGCAGGCCGGCATCGATAAGCTTTCCGATGC
TGTTGGCCTTACTCTGGGTCCAAGAGGGAGAAATGTTGTTCTGGATGAAT
TTGGAAGTCCGAAAGTGGTTAATGATGGAGTAACAATAGCCCGAGCTATT
GAGCTCGCAGATCCCATGGAAAATGCTGGTGCTGCTCTTATTAGGGAGGT
TGCAAGCAAAACCAATGACTCTGCTGGTGATGGAACAACAACTGCATCAG
TTCTTGCACGAGAAATAATTAAACTAGGACTCCTGAGTGTCACGTCTGGT
GCAAATCCTGTCTCCTTGAAGAGAGGGATTGATAAAACTGTACATGGGTT
GGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATCGAAGGTCGTGATGATA
TCAAAGCTGTTGCTACCATCTCTGCTGGGAATGATGACCTGATTGGGACA
ATGATCGCCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAAT
CGAGTCATCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGG
AGATTGACAGGGGTTACATCTCTCCTCAGTTTGTCACAACCCTGAGAAAT
TATTGTTGAAT
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