CX295096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.784e-27 Identity = 74/195 (37.95%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF---------XXXXXXXXXXXXXXQDWKNMKVISENKGGLSDEIP------------------------------------------HLVYISREKRPKHPHHYKAGAMNVL 613 EL PVD+FV+T D EPP+IT NTVLS+LAVDYPV K+ACYVSDD + L F +L ++FA+ WVPFCKK++++ RAP YF +D++ KV +S ++P LVY+SREKRP HH KAGAMN L Sbjct: 357 ELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKHKVDPAFVMERRAMKRDYEEFKVKINALVSVSQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVCDMDGNELPRLVYVSREKRPGFDHHKKAGAMNSL 551
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.671e-25 Identity = 72/196 (36.73%), Postives = 95/196 (48.47%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMK------------------------------------------------VISENKGGLSD----EIPHLVYISREKRPKHPHHYKAGAMNVL 613 ELP VD+FV TAD EPP++ ++TVLS++A DY KL Y+SDDA S L FY L EAS+FAK W+PFCKKY V+ R+P YF ++W MK +I NK D +P LVY++REK+P+ HH+KAG++N L Sbjct: 110 ELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYF--AKVASPPDGCGPKEWFTMKELYKDMTDRVNSVVNSGRIPEVPRCHSRGFSQWNENFTSSDHPSIVQILIDSNKQKAVDIDGNALPTLVYMAREKKPQKQHHFKAGSLNAL 303
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD+FV+T D EPPIIT NT+LS+LAVDYPV+K++CYVSDD S L F +L E S+FA+ WVPFCKKYNV+ RAP YF Sbjct: 290 KLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYF 373
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD FV+T D EPP++T NTVLS+L+VDYPV K++CYVSDD + L F +L E S+FAK WVPFCKK+N++ RAP YF Sbjct: 354 QLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYF 437
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25 Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP +DMFV+TAD E EPP++T NT+LS+LA DYPV KLACYVSDD + L F ++ EA+ FA +WVPFC+K+N++ R P YF Sbjct: 374 DLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYF 457
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FA+ WVPFCKKY+++ RAP YF Sbjct: 344 QLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FA+ WVPFCKKY+++ RAP YF Sbjct: 344 QLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.083e-24 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD+FV+T D EPP++T NTVLS+L+VDYPV K+ACYVSDD + L F SL E ++FAK WVPFCKK+N++ RAP YF Sbjct: 350 QLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAPEFYF 433
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24 Identity = 48/84 (57.14%), Postives = 68/84 (80.95%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV K++CY+SDD + L+F ++ EA+ FA LWVPFC+K+N++ R P YF Sbjct: 352 DLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYF 435
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD+FV+T D EPP++T NTVLS+LAVDYPV K+ACYVSDD + L F +L E ++F+K WVPFCKK+N++ RAP YF Sbjct: 337 QLAPVDVFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVACYVSDDGSAMLTFEALSETAEFSKKWVPFCKKFNIEPRAPEFYF 420 The following BLAST results are available for this feature:
BLAST of CX295096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295096 ID=CX295096; Name=CX295096; organism=Citrus clementina; type=EST; length=725bpback to top |