CX295096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 185 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 L PVD FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F SL E ++FA+ WVPFCKKY+++ RAP YF Sbjct: 264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 185 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 L PVD FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F SL E ++FA+ WVPFCKKY+++ RAP YF Sbjct: 264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L P+D FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FAK WVPFCKKY+++ RAP YF Sbjct: 354 QLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYF 437
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.413e-24 Identity = 73/227 (32.16%), Postives = 107/227 (47.14%), Query Frame = 2 Query: 104 FAIVFVILQVXXXXXXXXCVRLNRIQE-----LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKVISEN----------KGGLSDEI------------------------------------------PHLVYISREKRPKHPHHYKAGAMNVL 613 FA+ +VI Q NR+ E LP VD+FV TAD EPP + ++T+LS++A +YP K++ Y+SDD S L FY+L EAS FAK W+PFC++YN++ R+P YF ++W +K + E G + +EI P LVY++REK P++ H++KAGA+N L Sbjct: 65 FAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYF--SESEGHHNLCSPKEWSFIKNLYEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLIDGKSQNAVDDDGNVLPTLVYMAREKSPQYHHNFKAGALNAL 289
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.151e-24 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FAK WVPFCK+Y+++ RAP YF Sbjct: 353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYF 436
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.151e-24 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L PVD FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FAK WVPFCK+Y+++ RAP YF Sbjct: 353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYF 436
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.151e-24 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L+F SL E S+FA+ WVPFCKKY+++ RAP YF Sbjct: 334 QLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLAETSEFARKWVPFCKKYSIEPRAPEWYF 417
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.116e-24 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 185 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 L PVD+FV+T D EPP+IT NTVLS+LAVDYPV K+ACYVSDD + L F +L + ++FA+ WVPFCKK+N++ RAP YF Sbjct: 353 LAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.173e-24 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L VD FV+T D EPP+IT NTVLS+LA+DYPV K++CYVSDD + L+F SLVE + FA+ WVPFCKKY+++ RAP YF Sbjct: 259 QLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYF 342 HSP 2 Score: 21.9422 bits (45), Expect = 4.173e-24 Identity = 8/17 (47.06%), Postives = 10/17 (58.82%), Query Frame = 3 Query: 12 KWTPFTYKTYPQRLQER 62 KW+P +TY RL R Sbjct: 234 KWSPINRETYIDRLSAR 250
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV KLACY+SDD + L F +L + + FA WVPFC+K+N++ R P YF Sbjct: 398 DLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYF 481 The following BLAST results are available for this feature:
BLAST of CX295096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295096 ID=CX295096; Name=CX295096; organism=Citrus clementina; type=EST; length=725bpback to top |