CX295096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 185 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 L PVD+FV+T D EPP++T NTVLS+LA+DYPV K++CYVSDD S L F SL E ++FA+ WVPFCKK++++ RAP YF Sbjct: 314 LAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYF 396
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L P+D+FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F +L E ++FA+ WVPFCKK+N++ RAP YF Sbjct: 347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 50/84 (59.52%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +L P+D+FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F +L E ++FA+ WVPFCKK+N++ RAP YF Sbjct: 347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP +D+FVT+AD E EPP++T NT+LS+LA DYPV KLACY+SDD + L+F +L E + FA+ WVPFC+K+ V+ R P YF Sbjct: 407 DLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYF 490
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 185 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 L PVD+FV+T D EPP+IT NTVLS+LAVDYPV K+ACYVSDD + L F +L E ++FA+ WVPFCKKY ++ RAP YF Sbjct: 352 LSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYF 434
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 47/84 (55.95%), Postives = 67/84 (79.76%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP +D+FV+TADAE EPP++T NT+LS+L+VDYPV KL+ Y+SDD S + F ++ EA+ FAK+WVPFC+K+ ++ R P YF Sbjct: 202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYF 285
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 2 Query: 170 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 N +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD + L F ++ EA+ FA +WVPFC+K++++ R P YF Sbjct: 392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYF 479
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 2 Query: 170 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 N +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD + L F ++ EA+ FA +WVPFC+K++++ R P YF Sbjct: 392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYF 479
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 EL VD+FV+T D EPP+IT NTVLS+LAVDYPV ++ACYVSDD + L F +L E ++FA+ WVPFCKKY ++ RAP YF Sbjct: 339 ELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYF 422
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.668e-23 Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 185 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD S L F SL E ++FA+ WVPFCKK++++ RAP YF Sbjct: 343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425 The following BLAST results are available for this feature:
BLAST of CX295096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295096 ID=CX295096; Name=CX295096; organism=Citrus clementina; type=EST; length=725bpback to top |