CX295096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.829e-22 Identity = 46/85 (54.12%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 179 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 Q LP VD+FV TAD + EPP + ++T+LS++A +YP K++ Y+SDD S L FY+L EAS FAK W+PFCK+YN++ R+P YF Sbjct: 100 QNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYF 184 HSP 2 Score: 23.0978 bits (48), Expect = 2.829e-22 Identity = 8/17 (47.06%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 12 KWTPFTYKTYPQRLQER 62 +W PF +T+ RL ER Sbjct: 81 RWRPFRRRTFRDRLAER 97
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21 Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 2 Query: 104 FAIVFVILQVXXXXXXXXCVRLNRIQE---LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 FA ++V+ Q+ V + + + LP +D+FVTTAD + EPP+ T NTVLS+LA YP K+ CYVSDDA + + ++VEA++FA LWVPFC+K+ V+ R P YF Sbjct: 112 FAFMWVLDQLPKTMPVRRAVDVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21 Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 179 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTATC 625 ++ P +D+F+ TAD EPP++ VNT LS++A +YP K++ YVSDD S L F++L+EA+KF+K W+PFCKK NVQ R+P YF S SDE +L + + + + H ++G + TC Sbjct: 96 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYF-----------------------SSESHSRSDEAENLKMMYEDMKSRVEHVVESGKVETAFITC 221
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21 Identity = 47/84 (55.95%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 ELP VD+FVTT D EP + TVN++LS+LA DYPV + ACY+SDD + +++ ++VE +KFA+LWVPFC+K+ V+ RAP YF Sbjct: 174 ELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYF 257
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21 Identity = 46/84 (54.76%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP VD+FVTT D EP + TVNT+LS+LA DYPV + ACY+SDD + +++ ++VE +KFA+LWVPFC+K+ V+ R+P YF Sbjct: 168 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 251
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21 Identity = 46/84 (54.76%), Postives = 65/84 (77.38%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP VD+FVTT D EP + TVNT+LS+LA DYPV + ACY+SDD + +++ ++VE +KFA+LWVPFC+K+ V+ R+P YF Sbjct: 138 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYF 221
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 179 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 ++ P +D+F+ TAD EPP++ VNT LS++A +YP K++ YVSDD S L ++L+EA+KF+K W+PFCKK NVQ R+P YF Sbjct: 115 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYF 199
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20 Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 2 Query: 185 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 LP +D+F+ T D EP I T+N +LS+LA DYPV K ACY+SDD S +++ L+E +KFA LWVPFC+K++++ RAP YF Sbjct: 169 LPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYF 251
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20 Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP +D+F++TAD EP ++T NT+LS+LA +YPV KL Y+SDD + L F S+ EA FAK+WVPFC+K++++ R P YF Sbjct: 235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYF 318
BLAST of CX295096 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20 Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 2 Query: 182 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 433 +LP +D+F++TAD EP ++T NT+LS+LA +YPV KL Y+SDD + L F S+ EA FAK+WVPFC+K++++ R P YF Sbjct: 235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYF 318 The following BLAST results are available for this feature:
BLAST of CX295096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295096 ID=CX295096; Name=CX295096; organism=Citrus clementina; type=EST; length=725bpback to top |