CX295105

Overview
NameCX295105
Unique NameCX295105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.490e-56
Identity = 105/232 (45.26%), Postives = 146/232 (62.93%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASL 700
            ++LYCG+CH+DL  +KN+WGF+ +P+VPGHEIAG VT+                     +C  CE C  DLE+YCPK + TY+S    GT T GGYSD +V ++R++++FPD++PLDA APLLCAGITVYSP+KY+G+ E                              IS+SP+K++E ++ LGADSFL S DP++++ A GT+D IIDT+SAVH ++ L+GLL     L
Sbjct:   36 KILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-PYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKL 266          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.394e-56
Identity = 104/232 (44.83%), Postives = 140/232 (60.34%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASL 700
            ++L+CGICH+DL  IKNEW  S++P+VPGHEIAG VTE                     +C SCESC N  EN+CP+ + TY+S++ DGT+TYGGYS  +V +ER++V FP++MPLD  APLLCAGITVY+P+KY GL                                IS+SP KK E LE LGAD+F+ S   ++++ A  T+DG+I+TVSA  P+ P + LL P   +
Sbjct:   46 KILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGKM 277          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.503e-54
Identity = 106/232 (45.69%), Postives = 136/232 (58.62%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASL 700
            +VL+CG+CH+D   I N WGF+ +P+VPGHEI G VTE                     +C SCESC ++ E++C   I TY SI  DGT+T+GGYSD MVA+E +I+R+P ++PLD+ APLLCAGIT YSPLKY+GL +                              I  S SK+ E LE LGADSFL + D +Q++GA  +LDGIIDTV   HP+ PL  LL P   L
Sbjct:   43 KVLFCGVCHSDHHMIHNNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKL 274          

HSP 2 Score: 23.8682 bits (50), Expect = 2.503e-54
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  679 IKSQGKLVLVGAPD 720
            +K  GKLV+VGAP+
Sbjct:  268 LKPNGKLVMVGAPE 281          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.180e-53
Identity = 103/235 (43.83%), Postives = 134/235 (57.02%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASLFWL 709
            +VLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD +V NE Y++R P  +PLD AAPLLCAG+TVYSP+   GL                                ISTSP K+ E LEHLGAD FL SRD  Q+  A GT+DGI++TVSA HP+ PL  L+ P A + ++
Sbjct:  113 KVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFV 347          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 7.652e-53
Identity = 105/238 (44.12%), Postives = 134/238 (56.30%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTD---GTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASLFWL 709
            +VLYCGICHTDL  +KN+WG +++P+VPGHEI G VT                      +C  CE C N  ENYC KM+ T + ++ D   G  T GG+SD +V NE Y++R P  +PLD+AAPLLCAG+TVYSP+   GL                                ISTSP K+ E LEHLGAD FL SRD  Q+  A  T+DGI++TVSA HPI PL  L+ P A + ++
Sbjct:  113 KVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFSLMKPMAQMVFV 350          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 103/238 (43.28%), Postives = 138/238 (57.98%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLA-EQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASLFWLVL 715
            ++L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT   GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+  E                              IS S  K+ E ++ LGADSFL + D  +++ A+GT+D IIDTVSA H +LPL  LL     L  L L
Sbjct:   37 KILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGL 274          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.960e-52
Identity = 101/232 (43.53%), Postives = 134/232 (57.76%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASL 700
            +VLYCGICHTDL  IKNEWG +++P+VPGHEI G V                       +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y++R P S+P D AAPLLCAG+TVYSP+  +GL                                IS+SP+K+ E LE LGAD+FL+SRD + +  A  T+DGIIDTVSA HP++PL+ LL P+  +
Sbjct:   38 KVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKREEALERLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQM 269          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.477e-52
Identity = 102/232 (43.97%), Postives = 134/232 (57.76%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASL 700
            +VLYCGICHTDL  IKNEWG +++P+VPGHEI G VT                      +C +C+SC    ENYCP M++T +  +  G  T GG+SD MV  + Y+VR P S+P D AAPLLCAG+TVYSP+  +GL                                IS+SP+K+ E L  LGAD+FL+SRD + +  A  T+DGIIDTVSA HP++PL+ LL P+  +
Sbjct:   38 KVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQM 269          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.215e-51
Identity = 103/239 (43.10%), Postives = 138/239 (57.74%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTI-TYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLA-EQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASLFWLVL 715
            ++L+CG+CH+DL  IKN WGFS +P++PGHEI G  T+                     +C SCESC  DLENYCPK++ TY+S ++DGT    GGYSD +V + R+++  PD +P D+ APLLCAGITVYSP+KY+G+  E                              IS S  K+ E ++ LGADSFL + D  +++ A+GT+D IIDTVSA H +LPL  LL     L  L L
Sbjct:   37 KILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGL 275          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.119e-51
Identity = 107/234 (45.73%), Postives = 136/234 (58.12%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLD-AAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTS-PSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASL 700
            EVLYCGICHTDL   KN++G S++P VPGHE+ G V E                     +C SC++C ++LENYCPK ILT    + DGT TYGGYSD MV +E ++ R P+ +PLD   +  LC G + +SPLKY+GL +                              ISTS P+KK E +++LGADSFL SRDPDQ++    TLDGIIDTVSA H I+PL+GLL     L
Sbjct:   44 EVLYCGICHTDLHMAKNDFGNSIYPYVPGHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVTRIPEGLPLDGCGSSSLCWGYS-HSPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKL 276          

HSP 2 Score: 22.7126 bits (47), Expect = 7.119e-51
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  679 IKSQGKLVLVGA 714
            +KS GKLVL+GA
Sbjct:  270 LKSHGKLVLIGA 281          
The following BLAST results are available for this feature:
BLAST of CX295105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MTDH1_STYHU1.490e-5645.26Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH3_ORYSJ7.394e-5644.83Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
MTDH_APIGR2.503e-5445.69Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CAD8B_ORYSJ1.180e-5343.83Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8C_ORYSJ7.652e-5344.12Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CADH3_ARATH2.226e-5243.28Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CAD8A_ORYSJ4.960e-5243.53Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CAD8D_ORYSJ6.477e-5243.97Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH2_ARATH3.215e-5143.10Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH3_STYHU7.119e-5145.73Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]

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Properties
Property NameValue
Genbank descriptionC05068F06SK DroRLeaf1 Citrus clementina cDNA clone C05068F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295105 ID=CX295105; Name=CX295105; organism=Citrus clementina; type=EST; length=748bp
GGCTGAGGTATTGTATTGTGGGATCTGCCATACTGATCTCTCCAACATCA
AGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATT
GCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGG
AGATAAAGTTGGAGTTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGA
GCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTAC
AGTTCCATTAACACTGACGGAACAATCACATACGGAGGCTACTCTGATCA
CATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCC
TTGATGCTGCTGCCCCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCA
TTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCATCGTTGG
CCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTTTGGGG
CCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGAAGTTCTT
GAACATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTGACCAATT
GCAGGGTGCTATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTG
TGCACCCCATTTTGCCATTGGTCGGTCTATTAAGTCCCAGGGCAAGCTTG
TTCTGGTTGGTGCTCCGGACAGCCACTCGAGCTACCTGTGATTTCCTT
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