CX295105

Overview
NameCX295105
Unique NameCX295105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2788 contig Ccv1_Contig2788:107..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.077e-42
Identity = 86/226 (38.05%), Postives = 121/226 (53.54%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLL 682
            +VLYCG+CH+DL  +KN+ G S +P+VPGHE+ G+V E                     +C +C  C  ++E YC K I   + + TDG  T GG+++ MV ++ ++V+ P+ M  + AAPLLCAGITVYSP  +FG  +                              IS+S  K+ E LEHLGAD +L S D D++Q A  +LD IIDTV   HP+   + LL
Sbjct:   40 KVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLL 265          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.144e-41
Identity = 87/226 (38.50%), Postives = 118/226 (52.21%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLL 682
            +VLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL                                IS+S  K+ E ++ LGAD++L S D   +  A  +LD IIDTV   HP+ P + LL
Sbjct:   40 KVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEPYLALL 265          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.775e-41
Identity = 87/226 (38.50%), Postives = 120/226 (53.10%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLL 682
            +VL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+TVYSPL  FGL +                              IS+S  K+TE LEHLGAD++L S D + ++ A  +LD I DT+  VHP+ P + LL
Sbjct:   40 KVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALL 264          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.687e-39
Identity = 81/225 (36.00%), Postives = 115/225 (51.11%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLL 682
            ++ CGICHTDL   KN+ G S +PMVPGHE+ GEV E                      C  C  C  DLE YCPK I +Y+ +  +G  T GG++   V +++++V+ P+ M ++ AAPLLCAG+TVYSPL +FGL +                              IS+S  K+ E L+ LGAD ++   D  ++     +LD +IDTV   H + P + LL
Sbjct:   41 IICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLL 265          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.815e-39
Identity = 81/225 (36.00%), Postives = 120/225 (53.33%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLL 682
            + +CG+C+ D+   +N +  S++P+VPGHEIAG VTE                     +C  CE+C + LEN+C K ++TY+S+++DGT+T GGYS H++ ++RY  + P   PL  AAPLLCAGITVY+P+    + +                               STS SK+ E +  LGAD+F+ S D +Q++    +L  IIDT S  H   P + LL
Sbjct:   41 ITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIIDTASGDHQFDPYLSLL 265          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.450e-35
Identity = 80/225 (35.56%), Postives = 115/225 (51.11%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLL 682
            + +CG+C+ D+   +N+ G S +P+VPGHEIAG VT+                     +C  CE C    E  C K + T++ I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGITVY+P+    + +                               STS SKK E L  LGA++F+ S D DQ++    +LD ++DT S  H   P + LL
Sbjct:   42 ITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLDFLVDTASGDHAFDPYMSLL 266          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.734e-34
Identity = 80/216 (37.04%), Postives = 112/216 (51.85%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-MILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSA 649
            ++ + GICH+D+ +  +EWG  +FPMVPGHEIAG VT                      +C  CE C N  E +C K ++ TY+S++ DG  TYGGYS  +V  +R++VR PD + +D A+PLLCAGIT YSPLK++ +                                +S S +KK E LE LGA+ +  + DP       G  D I++TVSA
Sbjct:   37 DIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVG-PGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTVSA 250          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.772e-33
Identity = 79/216 (36.57%), Postives = 107/216 (49.54%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSA 649
            ++ + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++                                  + +   KK E    LGA S+  + DPD  +   G  D I++TVSA
Sbjct:   34 DIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGAN--TRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGLRLGAKSYYATADPDTFRKLRGGFDLILNTVSA 247          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.772e-33
Identity = 79/216 (36.57%), Postives = 107/216 (49.54%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSA 649
            ++ + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++                                  + +   KK E    LGA S+  + DPD  +   G  D I++TVSA
Sbjct:   34 DIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGAN--TRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGLRLGAKSYYATADPDTFRKLRGGFDLILNTVSA 247          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.834e-30
Identity = 79/228 (34.65%), Postives = 112/228 (49.12%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGT-ITYGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLL 682
            E+ YCG+CH+DL  +++EW  +++P VPGHEI G V                       +C  CE C + LENYC  M  TY+S   D    T GGYS  +V +ERY++R       L A APLLCAGIT YSPL+++  A                                +TS +K+ E  + LGAD  +NSR+ D++   + + D I++TV+A H +     LL
Sbjct:   33 EIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLL 258          
The following BLAST results are available for this feature:
BLAST of CX295105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CADH2_TOBAC6.077e-4238.05Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH2_ORYSJ5.144e-4138.50Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_EUCBO8.775e-4138.50Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH5_ARATH3.687e-3936.00Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH4_ORYSJ4.815e-3936.00Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH1_ARATH1.450e-3535.56Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHA_BACSU2.734e-3437.04Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
ADHC_MYCTU1.772e-3336.57NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO1.772e-3336.57NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
YAHK_ECOLI1.834e-3034.65Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionC05068F06SK DroRLeaf1 Citrus clementina cDNA clone C05068F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295105 ID=CX295105; Name=CX295105; organism=Citrus clementina; type=EST; length=748bp
GGCTGAGGTATTGTATTGTGGGATCTGCCATACTGATCTCTCCAACATCA
AGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATT
GCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGG
AGATAAAGTTGGAGTTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGA
GCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTAC
AGTTCCATTAACACTGACGGAACAATCACATACGGAGGCTACTCTGATCA
CATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCC
TTGATGCTGCTGCCCCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCA
TTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCATCGTTGG
CCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTTTGGGG
CCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGAAGTTCTT
GAACATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTGACCAATT
GCAGGGTGCTATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTG
TGCACCCCATTTTGCCATTGGTCGGTCTATTAAGTCCCAGGGCAAGCTTG
TTCTGGTTGGTGCTCCGGACAGCCACTCGAGCTACCTGTGATTTCCTT
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