CX295105

Overview
NameCX295105
Unique NameCX295105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.407e-22
Identity = 66/216 (30.56%), Postives = 105/216 (48.61%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXA--CHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVS 646
            +V YCGICH+DLS I NEWGFS +P+V GHE+ G V                       A  C  C++C +  +  C +      ++ T   +  GG+++ + A+ ++++  P+++ +++A PLLC GITV+ PL    +                                 S++P+K+ EVL  +GAD  +NSRDP  L+   G  D II+TV+
Sbjct:   34 QVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQ-----GAVPT--IMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHIT-ATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLA-MGADKVVNSRDPQALKALAGQFDLIINTVN 240          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 62/240 (25.83%), Postives = 104/240 (43.33%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTY--------SSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLVGLLSPRASL 700
            E+ Y GICH+D   I  EW    FP++PGHE+ G V +                     +C  C+ C + +E +C                 I   G ITYGGYS+ ++  + ++ +FP ++ ++  APL+CAG T YSPL+   +                                I+ +  K  + + +LGA+  + S +  Q+    G+ D I+ T+   H I+P + LL  +A++
Sbjct:  101 EIYYTGICHSDWHFIVGEWKAD-FPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLRQAKVG-PGMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTNVWQMNQHKGSFDFILSTIPMAHDIVPYIELLKYKATI 338          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 2
Query:   17 CGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 403
            CG+C +D+      WG    P+V GHEI G+V +                      +C  C+ C ND E YC K + TYS    DG ++ GGY++++  +E ++V  P+++P   AAPLLC G+TVYSPL
Sbjct:   43 CGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL 172          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.727e-16
Identity = 47/135 (34.81%), Postives = 66/135 (48.89%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPK-MILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 403
            E+  CGIC +D       WG      + GHEI G V +                      AC  CE C +D E YC    +LT  +   DG I+ GG++ H+  +E + ++ P+++P   AAPLLC GITV+SPL
Sbjct:   39 EIEACGICGSDFHIAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPL 173          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.712e-15
Identity = 48/139 (34.53%), Postives = 65/139 (46.76%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 418
            +V Y G+CHTDL  +K +W   +  P+V GHE AG V                       +C +CE C    E  CP   L  S    DGT     +  + +    +  + P ++PLDA AP+LCAGITVY  LK  G+
Sbjct:   37 KVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASL--SGYTVDGT-----FQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGV 168          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15
Identity = 44/134 (32.84%), Postives = 65/134 (48.51%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            + Y G+CHTDL  ++ +W   +  P++ GHE AG V +                     +C +CE C    E  CP + L  S    DGT     +  + +AN  +    P+S+PL+ AAP++CAGIT Y  LK
Sbjct:   40 IKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQL--SGYTVDGT-----FQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALK 166          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15
Identity = 43/134 (32.09%), Postives = 59/134 (44.03%), Query Frame = 2
Query:   17 CGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 415
            CG+CHTDL     +W      P++PGHE  G V E                     AC  CE C    E  CP  +    S++       GGY+++  A   Y+ + PD++     AP+LCAG+T Y  LK  G
Sbjct:   35 CGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCPHQLNGGYSVD-------GGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSG 161          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.270e-15
Identity = 54/210 (25.71%), Postives = 83/210 (39.52%), Query Frame = 2
Query:   17 CGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEVLEHLGADSFLNSRDPDQLQGAMGTLDGIIDTV 643
            CG+CHTDL     +W      P++PGHE  G + E                     AC  C+ C +  E  C +      S++       GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G A+                              +     +K E+ + LGAD  +N +  D  Q     + G+  TV
Sbjct:   35 CGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDLG-DEKLELAKQLGADLVVNPKHDDAAQWIKEKVGGVHATV 235          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.411e-14
Identity = 50/137 (36.50%), Postives = 63/137 (45.99%), Query Frame = 2
Query:   14 YCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX--ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 415
            Y G+CHTDL  +K +W   S  P++ GHE AG V                         +C SCE C    E  CP   L  S    DGT     +  + +       + PD++PLDAAAP+LCAGITVY  LK  G
Sbjct:   40 YSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASL--SGYTVDGT-----FQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESG 169          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14
Identity = 42/134 (31.34%), Postives = 60/134 (44.78%), Query Frame = 2
Query:   17 CGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 415
            CG+CHTDL     +W      P++PGHE  G V E                     AC  C+ C +  E  C        S++       GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G
Sbjct:   35 CGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG 161          
The following BLAST results are available for this feature:
BLAST of CX295105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
YJGB_ECOLI1.407e-2230.56Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
YL498_MIMIV1.556e-2125.83Probable zinc-type alcohol dehydrogenase-like prot... [more]
ADH6_YEAST2.654e-2136.92NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
ADH7_YEAST5.727e-1634.81NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADH1_ASPFN3.712e-1534.53Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH_SCHPO8.270e-1532.84Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH2_BACST8.270e-1532.09Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST8.270e-1525.71Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_EMENI1.411e-1436.50Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH3_BACST3.143e-1431.34Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]

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Properties
Property NameValue
Genbank descriptionC05068F06SK DroRLeaf1 Citrus clementina cDNA clone C05068F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295105 ID=CX295105; Name=CX295105; organism=Citrus clementina; type=EST; length=748bp
GGCTGAGGTATTGTATTGTGGGATCTGCCATACTGATCTCTCCAACATCA
AGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATT
GCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGG
AGATAAAGTTGGAGTTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGA
GCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTAC
AGTTCCATTAACACTGACGGAACAATCACATACGGAGGCTACTCTGATCA
CATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCC
TTGATGCTGCTGCCCCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCA
TTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCATCGTTGG
CCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTTTGGGG
CCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGAAGTTCTT
GAACATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTGACCAATT
GCAGGGTGCTATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTG
TGCACCCCATTTTGCCATTGGTCGGTCTATTAAGTCCCAGGGCAAGCTTG
TTCTGGTTGGTGCTCCGGACAGCCACTCGAGCTACCTGTGATTTCCTT
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