CX295105

Overview
NameCX295105
Unique NameCX295105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH1_NEUCR (Alcohol dehydrogenase 1 OS=Neurospora crassa GN=adh-1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.037e-13
Identity = 42/138 (30.43%), Postives = 63/138 (45.65%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 418
            V Y G+CHTDL  +K +W  +   P+V GHE AG V                       +C +C  C    E  CP  +L+  +++       G +  + +A   ++ + P    L+  AP+LCAGITVY  LK  G+
Sbjct:   41 VKYSGVCHTDLHAMKGDWPLATKMPLVGGHEGAGVVVAKGELVTEVEVGDHAGIKWLNGSCLACSFCMQADEPLCPHALLSGYTVD-------GSFQQYAIAKAAHVAKIPKGCDLETTAPVLCAGITVYKGLKESGV 171          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.927e-13
Identity = 45/139 (32.37%), Postives = 62/139 (44.60%), Query Frame = 2
Query:    5 EVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 418
            ++ Y G+CHTDL  +   W   +  P+V GHE AG V                       +C  CE C    +  C +  L  S    DGT     +  + +    +  + P  +PLDAAAP+LCAGITVY  LK  G+
Sbjct:   37 KIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQL--SGYTVDGT-----FQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGV 168          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12
Identity = 45/134 (33.58%), Postives = 60/134 (44.78%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CH+DL     +W F L FP++ GHE AG V +                      C SCE C    E+ CP   L  +    DGT     + ++  A+       P ++ L   AP+LCAGITVY  LK
Sbjct:   41 VKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP--YLDGTGFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12
Identity = 45/134 (33.58%), Postives = 60/134 (44.78%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CH+DL     +W F L FP++ GHE AG V +                      C SCE C    E+ CP   L  +    DGT     + ++  A+       P ++ L   AP+LCAGITVY  LK
Sbjct:   41 VKYSGVCHSDLHAWHGDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCP--YLDGTGFTHDGT-----FQEYATADAVQAAHIPPNVNLAEVAPILCAGITVYKALK 167          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12
Identity = 44/134 (32.84%), Postives = 57/134 (42.54%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CHTDL   + +W      P+V GHE AG V                       +C SCE C    E  CPK  L+       G    G +  +  A+     R P ++ L   AP+LCAG+TVY  LK
Sbjct:   38 VKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADLS-------GYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALK 164          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.460e-11
Identity = 44/134 (32.84%), Postives = 56/134 (41.79%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAG+TVY  LK
Sbjct:   64 VKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALK 190          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH2_KLULA (Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN=ADH2 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.460e-11
Identity = 44/134 (32.84%), Postives = 56/134 (41.79%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAG+TVY  LK
Sbjct:   38 VKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLS-------GYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKALK 164          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11
Identity = 45/134 (33.58%), Postives = 56/134 (41.79%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CHTDL   K +W      P+V GHE AG V                       +C +CE C +  E  C K  L+       G    G +  +  A+     R P    L  AAP+LCAGITVY  LK
Sbjct:   38 VKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLS-------GYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALK 164          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11
Identity = 44/134 (32.84%), Postives = 54/134 (40.30%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CHTDL   K +W      P+V GHE AG V                       +C  CE C    E+ CP   L+       G    G +  +  A+     R P    L   AP+LCAGITVY  LK
Sbjct:   38 VKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADLS-------GYTHDGSFQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALK 164          
BLAST of CX295105 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11
Identity = 43/134 (32.09%), Postives = 57/134 (42.54%), Query Frame = 2
Query:    8 VLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 406
            V Y G+CHTDL   K +W   +  P+V GHE AG V                       +C SCE C    E+ CP+  L+       G    G +  +  A+     + P    L   AP+LCAG+TVY  LK
Sbjct:   40 VKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLS-------GYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKALK 166          
The following BLAST results are available for this feature:
BLAST of CX295105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
ADH1_NEUCR2.037e-1330.43Alcohol dehydrogenase 1 OS=Neurospora crassa GN=ad... [more]
ADH1_EMENI5.927e-1332.37Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH5_YEAST2.252e-1233.58Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS2.252e-1233.58Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH1_KLUMA6.553e-1232.84Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH3_KLULA1.460e-1132.84Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
ADH2_KLULA1.460e-1132.84Alcohol dehydrogenase 2 OS=Kluyveromyces lactis GN... [more]
ADH1_PICST2.490e-1133.58Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH2_PICST3.252e-1132.84Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH1_KLULA4.247e-1132.09Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]

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Properties
Property NameValue
Genbank descriptionC05068F06SK DroRLeaf1 Citrus clementina cDNA clone C05068F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295105 ID=CX295105; Name=CX295105; organism=Citrus clementina; type=EST; length=748bp
GGCTGAGGTATTGTATTGTGGGATCTGCCATACTGATCTCTCCAACATCA
AGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATT
GCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGG
AGATAAAGTTGGAGTTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGA
GCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACTCACCTAC
AGTTCCATTAACACTGACGGAACAATCACATACGGAGGCTACTCTGATCA
CATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGCATGCCCC
TTGATGCTGCTGCCCCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCA
TTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCATCGTTGG
CCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCTTTTGGGG
CCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGAAGTTCTT
GAACATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTGACCAATT
GCAGGGTGCTATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTG
TGCACCCCATTTTGCCATTGGTCGGTCTATTAAGTCCCAGGGCAAGCTTG
TTCTGGTTGGTGCTCCGGACAGCCACTCGAGCTACCTGTGATTTCCTT
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