CX295109

Overview
NameCX295109
Unique NameCX295109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 1
Query:   61 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKV 345
            S F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDPY R+ ARFWA Y+D K+
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDPYQRSQARFWANYIDNKI 107          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKVQFPFFV 363
            +LG W SPF  R  +ALK+K + YE++EE L +KS LLL  NP+HKK+PVL+HN K + ES +I+EY+DE W  +   ILP DPY+R+ ARF+A  VDE++    F+
Sbjct:    9 LLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN--PILPQDPYERSKARFFAKLVDEQIMNVGFI 113          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24
Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILP-------SDPYDRAVARFWAAYVDEKV 345
            +L  W SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  + P +LP          Y RA ARFWA YVD K+
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGT-PHLLPPANSGDADAAYARATARFWADYVDRKL 115          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 54/107 (50.47%), Postives = 77/107 (71.96%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSD------PYDRAVARFWAAYVDEKV 345
            +L  W SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  +   + P++       Y RA ARFWA YVD K+
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKL 115          
BLAST of CX295109 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 52/107 (48.60%), Postives = 74/107 (69.16%), Query Frame = 1
Query:   43 VLGAWPSPFVMRARIALKIKSVEYEFLEENLG-SKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEK 342
            VLG   SPF  RAR+AL ++ V YE L+E LG  KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K
Sbjct:    3 VLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDK 109          
The following BLAST results are available for this feature:
BLAST of CX295109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX1_NICPL5.222e-2963.16Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTXA_ARATH4.138e-2651.40Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU1_ORYSJ5.058e-2451.85Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI6.606e-2450.47Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE1.166e-2048.60Probable glutathione S-transferase BZ2 OS=Zea mays... [more]

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Properties
Property NameValue
Genbank descriptionC05068F10SK DroRLeaf1 Citrus clementina cDNA clone C05068F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295109 ID=CX295109; Name=CX295109; organism=Citrus clementina; type=EST; length=696bp
TAGAGAAAAAAAAAAAAGAAAATGGCAAAAAGCGACGTGAAGGTTTTGGG
TGCGTGGCCAAGCCCATTTGTGATGAGGGCAAGAATCGCACTTAAGATCA
AGTCTGTGGAGTATGAGTTTCTGGAGGAGAATTTGGGATCCAAAAGCGAG
CTTCTGCTTAAATCAAACCCTGTTCACAAGAAAATCCCAGTTCTGATTCA
CAATGATAAGCCTGTTTGCGAATCTCTCATCATTGTCGAGTACGTGGATG
AGGCTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGATCCTTATGAC
CGTGCCGTTGCTCGTTTCTGGGCCGCTTATGTTGATGAGAAGGTACAGTT
TCCTTTCTTTGTTTTGAAAAAAATGTTTTAAGTCAATTCTTTTTATTCGA
ATTATGTGCATCTAAAAATTTTTAATCTTTTTCAGTTTTGAAAACTGTTT
TCGGAAATTAATAAAGTCTCTCTTGGTAAATCAAGGAGGTAAAGTGCGTG
ATTGGAATTATTTCCGGTGGAAAAATGAACTTGAAAAGAAAACTAAAGAA
AGATTAAGAAAGCAGAGCCCAAGAGGAAAACAATCAATAGAATCTGGAAG
TTTGATTTTTCATAAAACGGGCTTTCTAGAGACCCCCAATAACCAATTCT
CTCATCAATTGCTAAGCAGTACTTTCAAGTCTCTCAACTCCCGAGC
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