CX295129

Overview
NameCX295129
Unique NameCX295129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10414 contig Ccv1_Contig10414:65..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 8.938e-74
Identity = 133/221 (60.18%), Postives = 168/221 (76.02%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N+WG   YP+VPGHEIVGVVT+VG  V KF+VGD VGVG +V SC++C++C  DLE YCPK + TY S Y  GT TYGGYSD +V  + +VV+ P+  PLDA APLLCAGITVYSP+++YG+ +PG                KF KA G+KVTVISTSP+K++EA+++LGADSFLVS+D ++M+AAMGTMD IIDT+SA H LMPL+GLLK  GKLV +G
Sbjct:   58 KNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNSPYK-GTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVG 277          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.405e-72
Identity = 128/221 (57.92%), Postives = 162/221 (73.30%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +NEW ++IYP+VPGHEI GVVTEVG  V++FK GD+VGVGCMV SCRSC+SC    EN+CP+ + TY S   DGT+TYGGYS  +V  E FVV  PE  PLD  APLLCAGITVY+P++++GL+ PG                KFA+A G+KVTVIS+SP KK EA+ERLGAD+F+VS   +EM+AA  TMDG+I+TVSA  P+ P + LLK  GK++L+G
Sbjct:   61 KNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGKMILVG 281          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 8.365e-72
Identity = 128/222 (57.66%), Postives = 161/222 (72.52%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +N+WGNA+YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  VGSCR+CDSC    ENYCP +++T   K + G  T GG+SD +V +EH+V+R+P G PLD  APLLCAG+TVYSP+  +GL+ PG                KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA GTMDGI++TVSA HP+ PL  L+K   ++V +GA
Sbjct:  128 KNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGA 349          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 5.995e-70
Identity = 128/221 (57.92%), Postives = 164/221 (74.21%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N+WG   YP+VPGHEI G+VT+VGS V+KFK GD+VGVG +V SC+ C+ C  DLE+YCPK + TY S Y  GT T GGYSD +V  + FV++ P+  PLDA APLLCAGITVYSP+++YG+ +PG                KF KA G+KVTVIS+SP+K+SEA++ LGADSFL+S D ++M+AA GTMD IIDT+SAVH L+ L+GLLK  GKLV +G
Sbjct:   51 KNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNSPYK-GTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVG 270          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 1.744e-69
Identity = 125/221 (56.56%), Postives = 160/221 (72.40%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N+WG + YP+VPGHEIVG+ T+VG  V+KFK GD+VGVG + GSC+SC+SC  DLENYCP++  TY +   DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+ + G                K  KA G+KVTVIS+S +K  EA+  LGADSFLV+ D  +M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ LG
Sbjct:   58 KNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALG 278          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.886e-69
Identity = 128/222 (57.66%), Postives = 159/222 (71.62%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-PGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N WG + YPI+PGHEIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY S+  DGT   GGYSD +V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G                K  KA G++VTVIS S  K+ EA++RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV LG
Sbjct:   52 KNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALG 273          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.075e-69
Identity = 128/222 (57.66%), Postives = 159/222 (71.62%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +NEWGNA+YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SCR+CDSC    ENYCP +++T     + G  T GG+SD MV  + +VVR+P   P D  APLLCAG+TVYSP+  YGL+ PG                KF KA G+KVTVIS+SP+K+ EA+ RLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V++GA
Sbjct:   53 KNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGA 274          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.519e-68
Identity = 126/222 (56.76%), Postives = 159/222 (71.62%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +NEWGNA+YP+VPGHEIVGVV  VG+ V++FK GD VGVG  V SCR+CDSC    ENYCP +++T     + G  T GG+SD MV  + +V+R+P   P D  APLLCAG+TVYSP+  YGL+ PG                KF KA G+KVTVIS+SP+K+ EA+ERLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V++GA
Sbjct:   53 KNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKREEALERLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGA 274          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.329e-68
Identity = 128/223 (57.40%), Postives = 159/223 (71.30%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTI-TYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK-PGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N WG + YPI+PGHEIVG+ T+VG  V+KFK GD+VGVG ++GSC+SC+SC  DLENYCPKV+ TY S+  DGT    GGYSD +V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G                K  KA G++VTVIS S  K+ EA++RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV LG
Sbjct:   52 KNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALG 274          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 9.571e-68
Identity = 124/224 (55.36%), Postives = 156/224 (69.64%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHD---GTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N+WGNA+YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SCR C+ C    ENYC K++ T     HD   G  T GG+SD +V +EH+V+R+P G PLD+ APLLCAG+TVYSP+  +GL+ PG                KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA  TMDGI++TVSA HP+ PL  L+K   ++V +G
Sbjct:  128 KNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFSLMKPMAQMVFVG 351          
The following BLAST results are available for this feature:
BLAST of CX295129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
MTDH_MEDSA8.938e-7460.18Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH3_ORYSJ6.405e-7257.92Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CAD8B_ORYSJ8.365e-7257.66Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
MTDH1_STYHU5.995e-7057.92Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH9_ARATH1.744e-6956.56Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH3_ARATH3.886e-6957.66Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CAD8D_ORYSJ5.075e-6957.66Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CAD8A_ORYSJ2.519e-6856.76Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH2_ARATH7.329e-6857.40Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CAD8C_ORYSJ9.571e-6855.36Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionC05068H06SK DroRLeaf1 Citrus clementina cDNA clone C05068H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295129 ID=CX295129; Name=CX295129; organism=Citrus clementina; type=EST; length=693bp
AGGGCCATTCAGATCTTCACTTGATCAAAATGAATGGGGCAATGCCATTT
ACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGA
AGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCAT
GGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACT
ACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACC
ATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGT
GGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCT
GTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAG
CCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGC
TGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCT
CCCCTAGCAAGAAGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTT
TTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGA
TGGTATCATCGATACAGTATCTGCAGTTCACCCGCTAATGCCGTTGATTG
GACTGTTGAAATCTCAAGGAAAGCTTGTACTTCTTGGTGCACC
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