CX295129

Overview
NameCX295129
Unique NameCX295129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10414 contig Ccv1_Contig10414:65..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.601e-57
Identity = 113/221 (51.13%), Postives = 144/221 (65.16%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++ TMV D+ FV++IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GK VLLG
Sbjct:   55 KNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKHVLLG 275          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.212e-56
Identity = 108/221 (48.87%), Postives = 145/221 (65.61%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVY PL  +GL + G+               K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D + DT+  VHPL P + LLK  GKL+L G
Sbjct:   55 KNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTG 275          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.434e-55
Identity = 110/221 (49.77%), Postives = 142/221 (64.25%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N  G + YP+VPGHE+VG V EVG +V+K+  GD VGVG +VG CR C  C  ++E YC K I +Y   Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AK+MG  VTVIS+S  K+ EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GKL+L+G
Sbjct:   55 KNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEPYLALLKLDGKLILMG 275          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 3.531e-54
Identity = 104/220 (47.27%), Postives = 143/220 (65.00%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 685
            +N + ++IYP+VPGHEI GVVTEVG+ V  FKVGD VGVG  V SC+ C++C   LEN+C K ++TY S   DGT+T GGYS  ++  + +  +IP   PL   APLLCAGITVY+P+  + +++PG                KF KA G+KVTV STS SK+ EA+  LGAD+F++S D+++M++   ++  IIDT S  H   P + LLK  G +VLL
Sbjct:   55 RNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIIDTASGDHQFDPYLSLLKVGGVMVLL 274          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.023e-54
Identity = 107/221 (48.42%), Postives = 145/221 (65.61%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG CRSC  C  D E YC K I  Y   Y DG  T GG++  +V  + FVV+IP+G   +  A ++CAG+TVYSPL  +GL + G+               K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G
Sbjct:   55 KNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTG 274          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.616e-52
Identity = 101/221 (45.70%), Postives = 139/221 (62.90%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            +N+ G++ YP+VPGHEI G+VT+VG  V +FKVGD VGVG  V SCR C+ C    E  C K + T+    HDG++T GGYS  +V  E +  +IP   PL++ APLLCAGITVY+P+  + +++PG                KF KA G+ VTV STS SKK EA+  LGA++F++S D D+M+A   ++D ++DT S  H   P + LLK  G  VL+G
Sbjct:   56 RNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLDFLVDTASGDHAFDPYMSLLKIAGTYVLVG 276          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.424e-48
Identity = 103/222 (46.40%), Postives = 136/222 (61.26%), Query Frame = 2
Query:   29 NEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            +EWG  I+P+VPGHEI GVVT VG+KV+K  VGD+VGVGC V SC  C+ C    E +C K V+ TY S  +DG  TYGGYS  +V  + FVVRIP+   +D  +PLLCAGIT YSPL+ + +  PG                +FA AMG +VTV+S S +KK EA+E LGA+ +  + D     A  G  D I++TVSA   +   + +L+  G LV +GA
Sbjct:   53 DEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVG-PGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTVSANLDVDAYLSMLRIDGTLVSVGA 272          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.710e-46
Identity = 106/220 (48.18%), Postives = 129/220 (58.64%), Query Frame = 2
Query:   32 EWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC-PKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SCR C+SC   +E YC P    TY S   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+S S  KK E   RLGA S+  + D D  +   G  D I++TVSA   L   + LL   G LV LG
Sbjct:   51 EWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAG-ANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQS-LKKMEDGLRLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELG 268          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.710e-46
Identity = 106/220 (48.18%), Postives = 129/220 (58.64%), Query Frame = 2
Query:   32 EWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC-PKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 688
            EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SCR C+SC   +E YC P    TY S   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+S S  KK E   RLGA S+  + D D  +   G  D I++TVSA   L   + LL   G LV LG
Sbjct:   51 EWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAG-ANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQS-LKKMEDGLRLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELG 268          
BLAST of CX295129 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.289e-42
Identity = 101/224 (45.09%), Postives = 127/224 (56.70%), Query Frame = 2
Query:   26 QNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGT-ITYGGYSDTMVADEHFVVRIPE-GAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 691
            ++EW   +YP VPGHEIVG V  VG +V K+  GD VGVGC+V SC+ C+ C   LENYC  +  TY S   D    T GGYS  +V  E +V+RI      L A APLLCAGIT YSPLR +    PG                K A AMG  V   +TS +K+ EA + LGAD  + SR+ DEM A + + D I++TV+A H L     LLK  G + L+GA
Sbjct:   48 RSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 269          
The following BLAST results are available for this feature:
BLAST of CX295129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CADH_SACOF7.601e-5751.13Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH1_EUCGU2.212e-5648.87Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH2_ORYSJ1.434e-5549.77Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH4_ORYSJ3.531e-5447.27Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH_EUCBO6.023e-5448.42Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH9.616e-5245.70Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHA_BACSU8.424e-4846.40Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
ADHC_MYCTU2.710e-4648.18NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.710e-4648.18NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
YAHK_ECOLI5.289e-4245.09Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionC05068H06SK DroRLeaf1 Citrus clementina cDNA clone C05068H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295129 ID=CX295129; Name=CX295129; organism=Citrus clementina; type=EST; length=693bp
AGGGCCATTCAGATCTTCACTTGATCAAAATGAATGGGGCAATGCCATTT
ACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGA
AGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCAT
GGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACT
ACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACC
ATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGT
GGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCT
GTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAG
CCTGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGC
TGTCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCT
CCCCTAGCAAGAAGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTT
TTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGA
TGGTATCATCGATACAGTATCTGCAGTTCACCCGCTAATGCCGTTGATTG
GACTGTTGAAATCTCAAGGAAAGCTTGTACTTCTTGGTGCACC
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