CX295133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_AGRT5 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ribB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.127e-42 Identity = 92/180 (51.11%), Postives = 118/180 (65.56%), Query Frame = 1 Query: 154 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + I +AIE I +G+ +I A+ TP+ +AF++ H G+VCV+M GE L+ LD+PLMV++ N E L TAFTV+VD GTTTG+SA DRA TV L S S+P DF RPGHIFPL+ GVL R GHTEA+VDL LAG P+ +CEV +DDG+MARLP+L F Sbjct: 4 AKIEDAIEAISRGEMVIVVDDEDRENEGDIIAASDSITPQQIAFMMNHARGLVCVAMPGERLDALDIPLMVSR--NTESLKTAFTVSVDYIPGTTTGISAADRAKTVRALVSEGSRPEDFARPGHIFPLRANPEGVLGRTGHTEAAVDLCRLAGKFPSGTICEVANDDGTMARLPQLEIF 181
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_NOCFA (Riboflavin biosynthesis protein ribBA OS=Nocardia farcinica GN=ribBA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.966e-42 Identity = 90/183 (49.18%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 F +I A+ DI GK LI AA+ ATPE +AF++++ +G +CV + GED +RL LP M A N +K TA+TV+VDA+ G TTG+SA DRATT+ LA D+K D RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA V+CE+V D+G MAR +LR F Sbjct: 4 FDTIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMIRYTSGYICVPLTGEDCDRLGLPPMYAT--NQDKHGTAYTVSVDAREGITTGISAADRATTMRLLADADAKADDLTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLRPAGVICEIVSQKDEGHMARTEELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_ENTS8 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ribB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42 Identity = 85/181 (46.96%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F + AI +R+G+ +I AA+ T E MA ++HG+GIVC+ + E ++LDLP+MV + N T FTVT++A HG TTGVSA DR TT+ + D+KP D +RPGH+FPL+ + GGVL R GHTEA++DL LAGF PA VLCE+ +DDG+MAR P+ F Sbjct: 13 FERVENAIAALREGRGVMVLDDENRENEGDMIFAAETMTVEQMALTIRHGSGIVCLCLTEERRKQLDLPMMV--ENNTSAFGTGFTVTIEAAHGVTTGVSAADRITTIRAAIADDAKPSDLHRPGHVFPLRAQPGGVLTRGGHTEATIDLVSLAGFKPAGVLCELTNDDGTMARAPECIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_CLONN (Riboflavin biosynthesis protein ribBA OS=Clostridium novyi (strain NT) GN=ribBA PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.188e-41 Identity = 87/181 (48.07%), Postives = 122/181 (67.40%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F++I EAIEDI+ GK L+MAA+ TPEA+ F+ K+ G++C+ M E L+ LDL MV + ++ TAFTV++D+ TTTG+SA +RA T+ + +K DF RPGHIFPL+ R+GGVLKRAGHTEA+VDLA LAG PA +CE++++DG+MAR+P L ++ Sbjct: 6 FNTIEEAIEDIKNGKMVVVVDDEDRENEGDLLMAAEKVTPEAINFMAKYARGLICMPMTEEKLKELDLYQMVINNTDTKE--TAFTVSIDSVE-TTTGISAFERALTITKAVEKGAKAKDFQRPGHIFPLRARKGGVLKRAGHTEAAVDLATLAGLTPAGTICEIMNEDGTMARVPDLMKY 183
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_YERPY (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ribB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AI+ +R G+ ++ AA+ T E MA ++HG+GIVC+ + E ++LDLP+MV N + TAFTVT++A G TTGVSA DR TT+ + ++KP D NRPGH+FPL+ + GGVL R GHTEAS+DLA LAG+ PA VLCE+ +DDGSMA P++ F Sbjct: 16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPAGVLCELTNDDGSMAHAPEVIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_YERPS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pseudotuberculosis GN=ribB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AI+ +R G+ ++ AA+ T E MA ++HG+GIVC+ + E ++LDLP+MV N + TAFTVT++A G TTGVSA DR TT+ + ++KP D NRPGH+FPL+ + GGVL R GHTEAS+DLA LAG+ PA VLCE+ +DDGSMA P++ F Sbjct: 16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPAGVLCELTNDDGSMAHAPEVIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_YERPP (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pestis (strain Pestoides F) GN=ribB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AI+ +R G+ ++ AA+ T E MA ++HG+GIVC+ + E ++LDLP+MV N + TAFTVT++A G TTGVSA DR TT+ + ++KP D NRPGH+FPL+ + GGVL R GHTEAS+DLA LAG+ PA VLCE+ +DDGSMA P++ F Sbjct: 16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPAGVLCELTNDDGSMAHAPEVIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_YERPN (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ribB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AI+ +R G+ ++ AA+ T E MA ++HG+GIVC+ + E ++LDLP+MV N + TAFTVT++A G TTGVSA DR TT+ + ++KP D NRPGH+FPL+ + GGVL R GHTEAS+DLA LAG+ PA VLCE+ +DDGSMA P++ F Sbjct: 16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPAGVLCELTNDDGSMAHAPEVIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_YERPG (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ribB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AI+ +R G+ ++ AA+ T E MA ++HG+GIVC+ + E ++LDLP+MV N + TAFTVT++A G TTGVSA DR TT+ + ++KP D NRPGH+FPL+ + GGVL R GHTEAS+DLA LAG+ PA VLCE+ +DDGSMA P++ F Sbjct: 16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPAGVLCELTNDDGSMAHAPEVIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_YERPE (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pestis GN=ribB PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AI+ +R G+ ++ AA+ T E MA ++HG+GIVC+ + E ++LDLP+MV N + TAFTVT++A G TTGVSA DR TT+ + ++KP D NRPGH+FPL+ + GGVL R GHTEAS+DLA LAG+ PA VLCE+ +DDGSMA P++ F Sbjct: 16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPAGVLCELTNDDGSMAHAPEVIAF 191 The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bpback to top |