CX295133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCMM (Riboflavin biosynthesis protein ribBA OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ribBA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.319e-37 Identity = 87/181 (48.07%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDAK+G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA+ +LR F Sbjct: 6 SVERAVADIGAGKAVIVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLDGAVCDRLGLLPMYAV--NQDKHGTAYTVTVDAKNGVGTGISASDRATTMRLLADPASVAEDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAQTDELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_PHOPO (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Photobacterium phosphoreum GN=ribB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 79/180 (43.89%), Postives = 113/180 (62.78%), Query Frame = 1 Query: 154 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 S+ E IEDI QGK LI+A+ TPEA+ F+ +G G++C+++ E +L+LP+MV K N +K T FT++++A G TTG+S DRA TV + + D PGHIFPL ++GGVL RAGHTEA D+A LAG +P++V+ E+++DDG+MAR P+L F Sbjct: 4 STAQEIIEDIHQGKMVILMDDEDRENEGDLIIASDKVTPEAINFMATYGRGLICLTLNKERCLQLELPMMV--KSNTDKFATPFTISIEAASGVTTGISVNDRARTVQAAIAATATAKDIVMPGHIFPLMAQDGGVLARAGHTEAGCDVARLAGLEPSSVIVEILNDDGTMARRPQLEVF 181
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_DESRM (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Desulfotomaculum reducens (strain MI-1) GN=ribB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 81/181 (44.75%), Postives = 108/181 (59.67%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F + A+ +R G LI AQ MA +++ +GIVC+ + E + L LP+MV + N + TAFTVT++A HG TTGVSA DR TV T + ++KP D NRPGH+FPL+ GGVL+R GHTEA+VDL LAG P VLCE+ + DG+MARLP++ F Sbjct: 13 FERVERALRSLRNGNGVLVTDDENRENEGDLIFPAQTLNEVQMAMLIRECSGIVCLCLTDEKVRSLGLPMMV--ENNSSRFKTAFTVTIEAAHGVTTGVSAADRVKTVKTAVAENAKPEDLNRPGHVFPLRACPGGVLERQGHTEATVDLMKLAGLQPYGVLCELTNIDGTMARLPEVVTF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_BUCAT (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=ribB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 73/151 (48.34%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 L+ A + T E MA +++G+GIVC+ + ++L+LP+MV K+N T FTVT++A G +TGVSA+DR TT+ T + D+KP D NRPGH+FPL+ +GGVL R GHTEA++++ LAGF PA V+CE+ + DG+MAR P++ +F Sbjct: 43 LVFACENMTVEQMALSIRYGSGIVCLCITESKRKQLNLPMMV--KKNTSAYRTGFTVTIEASKGISTGVSAKDRLTTIKTAIADDAKPSDLNRPGHVFPLRAHKGGVLSRPGHTEAAIEIVSLAGFKPAGVICELTNKDGTMARTPEIIKF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_BUCAI (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ribB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 73/151 (48.34%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 L+ A + T E MA +++G+GIVC+ + ++L+LP+MV K+N T FTVT++A G +TGVSA+DR TT+ T + D+KP D NRPGH+FPL+ +GGVL R GHTEA++++ LAGF PA V+CE+ + DG+MAR P++ +F Sbjct: 43 LVFACENMTVEQMALSIRYGSGIVCLCITESKRKQLNLPMMV--KKNTSAYRTGFTVTIEASKGISTGVSAKDRLTTIKTAIADDAKPSDLNRPGHVFPLRAHKGGVLSRPGHTEAAIEIVSLAGFKPAGVICELTNKDGTMARTPEIIKF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_BUCA5 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=ribB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 73/151 (48.34%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 L+ A + T E MA +++G+GIVC+ + ++L+LP+MV K+N T FTVT++A G +TGVSA+DR TT+ T + D+KP D NRPGH+FPL+ +GGVL R GHTEA++++ LAGF PA V+CE+ + DG+MAR P++ +F Sbjct: 43 LVFACENMTVEQMALSIRYGSGIVCLCITESKRKQLNLPMMV--KKNTSAYRTGFTVTIEASKGISTGVSAKDRLTTIKTAIADDAKPSDLNRPGHVFPLRAHKGGVLSRPGHTEAAIEIVSLAGFKPAGVICELTNKDGTMARTPEIIKF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCGI (Riboflavin biosynthesis protein ribBA OS=Mycobacterium gilvum (strain PYR-GCK) GN=ribBA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 87/181 (48.07%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + GE +RL L M A N +K TA+TVTVDAK G TG+SA DRATT+ LA DS DF +PGH+ PL+ ++GGVL+R GHTEA+VDLA LAG A +CE+V D+G+MA+ +LR F Sbjct: 6 SVERAVADIAAGKAVVVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLAGEICDRLGLLPMYAV--NQDKHGTAYTVTVDAKVGVGTGISASDRATTMRLLADPDSVADDFTKPGHVVPLRAKDGGVLRRPGHTEAAVDLARLAGLQAAGTICEIVSQKDEGAMAQTDELRIF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_GEOSW (Riboflavin biosynthesis protein ribBA OS=Geobacillus sp. (strain WCH70) GN=ribBA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 82/180 (45.56%), Postives = 115/180 (63.89%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690 F I EAI ++ QGK + A+ ATPE + F++K+G G+VCV + E ++LDL MV N + TAFTV++D K TTTG+SA +R+ T+ L ++K DF RPGH+FPL ++GGVL+RAGHTEA+VDLA L G PA V+CE++ +DG+MAR+ LR+ Sbjct: 2 FDMIEEAIYELMQGKVIIVCDDEDRENEGDFVALAEKATPEVINFMIKYGRGLVCVPITEELADKLDLAPMV--NHNTDSHGTAFTVSIDYK-STTTGISAYERSMTIQALLDPNAKASDFKRPGHVFPLVAKKGGVLRRAGHTEAAVDLARLCGAKPAGVICEIIKEDGTMARVSDLRK 178
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_CORAM (Riboflavin biosynthesis protein ribBA OS=Corynebacterium ammoniagenes GN=ribBA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.029e-37 Identity = 91/181 (50.28%), Postives = 116/181 (64.09%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVV--DDDGSMARLPKLREF 693 SI EAI DI GK LI AA+LATPE +AF+V++ +G +CV + ED +RL+LP M+ + N++ TA+TVTVDA GTT G+SA RA T+L LA S DF RPGH+ PL R GVL+R GHTEA++DLA LAG PA VLCE+V +D +MAR +LR F Sbjct: 13 SIEEAIADIAAGKAVVVVDNEDRENEGDLIFAAELATPELVAFMVRYSSGYICVPLLPEDCKRLNLPPMMGR--NEDVRGTAYTVTVDANTGTT-GISATSRAETMLRLADPMSVVDDFTRPGHVVPLAARPNGVLERDGHTEAAIDLARLAGLRPAGVLCEIVSEEDPTTMARSEELRRF 190
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCTU (Riboflavin biosynthesis protein ribBA OS=Mycobacterium tuberculosis GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 86/181 (47.51%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDA++G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA +LR F Sbjct: 6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVF 184 The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bpback to top |