CX295133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCTA (Riboflavin biosynthesis protein ribBA OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 86/181 (47.51%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDA++G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA +LR F Sbjct: 6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCPA (Riboflavin biosynthesis protein ribBA OS=Mycobacterium paratuberculosis GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 86/181 (47.51%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDA++G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA+ +LR F Sbjct: 6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQDKHGTAYTVTVDARNGVGTGISASDRATTMRLLADPTSIAEDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAQTDELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCBT (Riboflavin biosynthesis protein ribBA OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 86/181 (47.51%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDA++G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA +LR F Sbjct: 6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCBP (Riboflavin biosynthesis protein ribBA OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 86/181 (47.51%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDA++G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA +LR F Sbjct: 6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCBO (Riboflavin biosynthesis protein ribBA OS=Mycobacterium bovis GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 86/181 (47.51%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDA++G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA +LR F Sbjct: 6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQDKHGTAYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA1 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium avium (strain 104) GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.956e-37 Identity = 86/181 (47.51%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVD--DDGSMARLPKLREF 693 S+ A+ DI GK LI AA+ ATPE +AF+V++ +G +CV + G +RL L M A N +K TA+TVTVDA++G TG+SA DRATT+ LA S DF RPGH+ PL+ ++GGVL+R GHTEA+VDLA +AG PA +CE+V D+GSMA+ +LR F Sbjct: 6 SVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMYAV--NQDKHGTAYTVTVDARNGVGTGISASDRATTMRLLADPTSIAEDFTRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAQTDELRVF 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_VIBCM (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ribB PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.166e-37 Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + A++ +R+G+ +I A + T MA +++ +GIVC+ + +RL LP MV + + TAFTV+++AKHG TTGVSA+DR TT+ T A+ +KP D RPGH+FPL+ R GGVL R GHTE +VDL +AG PA VLCE+ + DGSMA+ P++ EF Sbjct: 17 VENALQALREGRGVLLLDDEDRENEGDIIYAVESLTTAQMALMIRECSGIVCLCLTEAQADRLALPPMVVNNNSANQ--TAFTVSIEAKHGVTTGVSAQDRVTTIKTAANPQAKPEDLARPGHVFPLRARAGGVLARRGHTEGTVDLMQMAGLQPAGVLCELTNPDGSMAKTPEIIEF 192
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_VIBCH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Vibrio cholerae GN=ribB PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.166e-37 Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + A++ +R+G+ +I A + T MA +++ +GIVC+ + +RL LP MV + + TAFTV+++AKHG TTGVSA+DR TT+ T A+ +KP D RPGH+FPL+ R GGVL R GHTE +VDL +AG PA VLCE+ + DGSMA+ P++ EF Sbjct: 17 VENALQALREGRGVLLLDDEDRENEGDIIYAVESLTTAQMALMIRECSGIVCLCLTEAQADRLALPPMVVNNNSANQ--TAFTVSIEAKHGVTTGVSAQDRVTTIKTAANPQAKPEDLARPGHVFPLRARAGGVLARRGHTEGTVDLMQMAGLQPAGVLCELTNPDGSMAKTPEIIEF 192
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_VIBC3 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ribB PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.166e-37 Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + A++ +R+G+ +I A + T MA +++ +GIVC+ + +RL LPLMV + + TAFTV+++AKHG TTGVSA+DR TT+ T A+ +KP D RPGH+FPL+ R GGVL R GHTE +VDL +AG PA VLCE+ + DGSMA+ P++ F Sbjct: 17 VENALQALREGRGVLLLDDEDRENEGDIIYAVESLTTVQMALMIRECSGIVCLCLTEAQADRLALPLMVVNNNSANQ--TAFTVSIEAKHGVTTGVSAQDRVTTIKTAANPQAKPEDLARPGHVFPLRARAGGVLARRGHTEGTVDLMQMAGLQPAGVLCELTNPDGSMAKTPEIIAF 192
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_PELPD (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Pelobacter propionicus (strain DSM 2379) GN=ribB PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.166e-37 Identity = 81/178 (45.51%), Postives = 113/178 (63.48%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + A++ +R G+ LI AAQ T E +A +++ +GIVC+ + E + RLDLPLMV+ +N + TAFTV+++A G TTGVSA DR TT+ + D+ P +RPGH+FPL+ R GGVL+R GHTEA+VDL LAG P VLCE+ + DGSMAR+P++ F Sbjct: 18 VEAALDALRAGQGVLVTDDEQRENEGDLIFAAQSLTREQVAMLIRECSGIVCLCLTDEAVRRLDLPLMVS--DNSSRYQTAFTVSIEAAEGVTTGVSAADRLTTIRAAIADDAGPLCLSRPGHVFPLRARPGGVLERRGHTEATVDLMRLAGLKPCGVLCELTNPDGSMARMPEIVAF 193 The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bpback to top |