CX295133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_PELLD (Riboflavin biosynthesis protein ribBA OS=Pelodictyon luteolum (strain DSM 273) GN=ribBA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.503e-36 Identity = 85/182 (46.70%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDA-KHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F +I A+EDIRQGK I AA T E + FI + G++CV++ E L L MV + + + T FTV+VDA G TTG+S DRATT+ L S F+RPGHIFPL+ +GGVL+R GHTEA+VDLA LAG P +LCE++ DDGSMARLP+L +F Sbjct: 6 FDTIESAVEDIRQGKLVIVIDDEDRENEGDFIAAADHVTTEMINFITREARGLLCVAVTMERARELQLDPMVQRNTSQHE--TNFTVSVDAIAEGVTTGISVYDRATTIKMLGDPASHADSFSRPGHIFPLRAMDGGVLRRVGHTEAAVDLARLAGCSPVGLLCEILHDDGSMARLPELLKF 185
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_HAES2 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Haemophilus somnus (strain 2336) GN=ribB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36 Identity = 79/178 (44.38%), Postives = 114/178 (64.04%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AIE ++G LI A+ T E MA ++++G+GIVC+ + E ++LDLP MV + + TAFTV+++A G +TGVSA+DR TT+ + ++KP D +RPGH+FPL+ ++GGVL R GHTEA+VDLA AG PA V+CE+ +DDGSMAR ++ EF Sbjct: 16 VKRAIEAFKRGNGVLVLDDEDRENEGDLIFPAETITVEQMAKLIRYGSGIVCLCITDELCQQLDLPPMVQNNTSINQ--TAFTVSIEAAQGVSTGVSAQDRVTTIQVAIADNAKPQDLSRPGHVFPLRAKKGGVLARRGHTEAAVDLASWAGHKPAGVICEITNDDGSMARTLEIVEF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_BUCAP (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ribB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36 Identity = 70/151 (46.36%), Postives = 106/151 (70.20%), Query Frame = 1 Query: 241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 L+ +++ T E MA +++G+GIVC+ + ++L+LP+MV K N T FTVT++A G +TGVSA+DR TT+ T + D++P D NRPGH+FPL+ GG+L RAGHTEA++++ LAGF P V+CE+ + DGSM+R P++ +F Sbjct: 43 LVFSSETMTVEQMALTIRYGSGIVCLCITESKRKKLNLPMMV--KHNTSTYRTGFTVTIEASKGVSTGVSAKDRLTTIKTATADDAQPSDLNRPGHVFPLRANGGGILARAGHTEAAIEIVSLAGFKPYGVICELTNKDGSMSRTPEIIKF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_CYTH3 (Riboflavin biosynthesis protein ribBA OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ribBA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36 Identity = 84/179 (46.93%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAK-HGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690 SI +AIE IR+G+ I AA+ TPE + F+ K G G++C + L L LMV + T FTV+VD +G TTG+SA DR+ T+ L D+KP D RPGHIFPLK ++ GVL+R GHTEA+VDLA LAGF PA VL E++ +DGSMARLP+L++ Sbjct: 8 SIADAIEAIRKGEVIIVVDDEDRENEGDFICAAECVTPEIINFMSKEGRGLICAPISEARCTELKLDLMVGSNTATHE--TPFTVSVDLLGNGCTTGISASDRSKTIRALVDPDTKPEDLGRPGHIFPLKAKDEGVLRRVGHTEAAVDLARLAGFKPAGVLIEIMSEDGSMARLPELKQ 184
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACV8 (Riboflavin biosynthesis protein ribBA OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ribBA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36 Identity = 83/179 (46.37%), Postives = 110/179 (61.45%), Query Frame = 1 Query: 154 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690 ++I EAI D R+GKF LI+AA+ TPE + F++KH G++C + + L+LP V N L T FTVTVD G +TGVS DRA T+ LA S P F RPGH+ PL ++ GVL+RAGHTEA +D+A LAG PAA L E++ +DG+MARLP+LR+ Sbjct: 7 NTIEEAIADFREGKFVIVVDDEDRENEGDLIVAAEKITPEQVNFMLKHARGVLCAPITISRCKELELPHQV--DTNTSVLGTPFTVTVDKLEGCSTGVSIHDRAATIRALADPTSTPETFGRPGHVNPLYAQDKGVLRRAGHTEACIDMARLAGLYPAAALMEIMSEDGTMARLPELRK 183
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_CLOBL (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=ribB PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.564e-36 Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + +A+E+++ GK LI A+ T MA +++ +GIVC+ + E +++L L MV+ N TAFT++++AK G TTGVSA DR TT+LT D KP D PGH+FPL+ R GGVL R GHTE +VDL LAG++PA +LCE+ + DG+MARLP++ F Sbjct: 16 VEKALENLKNGKGVLLVDDENRENEGDLIFPAETITVPQMAMLIRECSGIVCLCLTDEKVKKLGLTQMVSN--NTCTYETAFTISIEAKEGVTTGVSAADRVTTILTAVKDDCKPEDLCHPGHVFPLRARAGGVLTRPGHTEGTVDLMRLAGYNPAGILCELTNPDGTMARLPQIINF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHEFN (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella frigidimarina (strain NCIMB 400) GN=ribB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36 Identity = 75/183 (40.98%), Postives = 112/183 (61.20%), Query Frame = 1 Query: 145 EGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 E + + A+ +R+G+ +I + + T MA +++ +GIVC+ + E +L LP MV + + TAFT++++AKHG TTGVSA+DR TT+ T A+RD+K D PGH+FPL+ R GGV+ R GHTE +VDL +AG PA VLCE+ ++DGSMA+ P++ F Sbjct: 12 EPITRVENALAALREGRGVLLLDDEDRENEGDIIYSVEHLTTAQMALMIRECSGIVCLCLTDEHANKLQLPPMVINNNSANQ--TAFTISIEAKHGVTTGVSAQDRVTTIKTAANRDAKASDLAHPGHVFPLRARAGGVMSRRGHTEGTVDLMQMAGLMPAGVLCELANEDGSMAKTPEIIAF 192
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHESR (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella sp. (strain MR-7) GN=ribB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.712e-36 Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + +E +RQG+ LI AA+ T MA +++ +GIVC+ + E ++ L+LP MV + N + TAFTV+++AK G TTGVSA DR TT+ + ++KP D RPGH++PL+ + GGVL R GHTE ++DL LAG PA VLCEV + DG+MARLP++ F Sbjct: 16 VEAGLEALRQGQGVLVVDDEDRENEGDLIFAAESLTNAQMAMLIRECSGIVCLCLPDEKVKALELPPMV--ENNSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKAAIADNAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLMQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHESM (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella sp. (strain MR-4) GN=ribB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.712e-36 Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + +E +RQG+ LI AA+ T MA +++ +GIVC+ + E ++ L+LP MV + N + TAFTV+++AK G TTGVSA DR TT+ + ++KP D RPGH++PL+ + GGVL R GHTE ++DL LAG PA VLCEV + DG+MARLP++ F Sbjct: 16 VEAGLEALRQGQGVLVVDDEDRENEGDLIFAAESLTNAQMAMLIRECSGIVCLCLPDEKVKALELPPMV--ENNSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKAAIADNAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLMQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_PSEHT (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ribB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.712e-36 Identity = 78/180 (43.33%), Postives = 111/180 (61.67%), Query Frame = 1 Query: 145 EGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684 E + + AI ++QG+ + +A+ T MA +++ G+GIVC+ M E +++LDLP MV + TA+T+T++AK G TTGVSA DR TT+ + ++KP D +RPGH+F LK + GGVL R GHTEASVDL LAG P V+CE+ + DGSMARLP++ Sbjct: 11 EPLTRVENAITALQQGQGVLVVDDENRENEGDFVFSAEHLTTAQMAEMIREGSGIVCLCMGEERIKQLDLPQMVTHNTSQNN--TAYTITIEAKEGVTTGVSAADRVTTIKAATADNAKPEDLSRPGHVFGLKAKTGGVLVRRGHTEASVDLMQLAGLKPFGVICELTNPDGSMARLPEV 188 The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bpback to top |