CX295133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_PELPB (Riboflavin biosynthesis protein ribBA OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ribBA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.460e-36 Identity = 83/181 (45.86%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 145 EGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDA-KHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684 + F +I A+EDIRQGK I AA T E + FI + G++CV++ + + L L MV + + + T FTV+VDA G TTG+S DRA T+ L S DF+RPGHIFPL+ +GGVL+R GHTEA+VDLA LAG P +LCE+++DDGSMARLP+L Sbjct: 4 KNFDTIDAALEDIRQGKLVIVIDDEDREDEGDFIGAADKVTNEMVNFITREARGLLCVAVTMDRAKELQLDPMVQRNTSQHE--TNFTVSVDAIAEGVTTGISVYDRAMTIKMLGDLSSTADDFSRPGHIFPLRAMDGGVLRRVGHTEAAVDLARLAGCSPTGLLCEILNDDGSMARLPQL 182
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_DESDA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=ribB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.743e-36 Identity = 77/178 (43.26%), Postives = 108/178 (60.67%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + +A+ +R G LI AQ T MA +++H +GIVC+ + E RLDLP+M + N ++ TAFT++++A G TTGVSA DR T+ + ++ P + RPGH+FPL+ + GGVL+R GHTEA+VDL LAG P VLCE+ DDGSMARLP++ F Sbjct: 18 VQKALASLRAGGGVLVVDDEDRENEGDLIFPAQTITVPQMAMLIRHCSGIVCLCLTDEYTRRLDLPMMTERNTNTQQ--TAFTISIEAATGVTTGVSAADRVATIQAAVAENASPENLRRPGHVFPLRAKPGGVLERRGHTEATVDLMRLAGHAPCGVLCELTLDDGSMARLPQVAAF 193
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_CHRVO (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Chromobacterium violaceum GN=ribB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.743e-36 Identity = 77/151 (50.99%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 LI+AA T MA +++ G+GIVC+ + E ERL LP M A EN + TAFTV ++A G TTGVSA DR TT+ D+KPGD RPGH++P+ R GGV +R GHTEASV+LA LAGF PA VLCE+++ DG+M R +++++ Sbjct: 39 LILAADTLTVPEMARMIRDGSGIVCLCLTPERAERLQLPPMAA--ENGSRYGTAFTVAIEAAQGVTTGVSAADRTTTIRAAIHPDAKPGDLVRPGHVYPIVARAGGVRERRGHTEASVELARLAGFSPAGVLCELMNPDGTMMRGQQVQDY 187
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHESW (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella sp. (strain W3-18-1) GN=ribB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + + +RQG+ LI AAQ T MA +++ +GIVC+ + E ++ L+LP MV + N + TAFTV+++AK G TTGVSA DR TT+ + +KP D RPGH++PL+ + GGVL R GHTE ++DL LAG PA VLCEV + DG+MARLP++ F Sbjct: 16 VEAGLNALRQGQGVLVVDDEDRENEGDLIFAAQTLTNAQMAMLIRECSGIVCLCLPDEKVKALELPPMV--ENNSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKAAIADGAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLMQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHEPC (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ribB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + + +RQG+ LI AAQ T MA +++ +GIVC+ + E ++ L+LP MV + N + TAFTV+++AK G TTGVSA DR TT+ + +KP D RPGH++PL+ + GGVL R GHTE ++DL LAG PA VLCEV + DG+MARLP++ F Sbjct: 16 VEAGLNALRQGQGVLVVDDEDRENEGDLIFAAQTLTNTQMAMLIRECSGIVCLCLPDEKVKALELPPMV--ENNSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKAAIADGAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLMQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHELP (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ribB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 77/183 (42.08%), Postives = 115/183 (62.84%), Query Frame = 1 Query: 145 EGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + + + A+ +R G+ LI +A+ T E MA +++ +GIVC+ + E +++L+LP MV ++N + TAFTV+++AK G TTGVSA DR TT+ + D+KP D RPGH++PL+ + GGVL R GHTE ++DL LAG PA VLCEV + +G+MARLP++ F Sbjct: 11 DAITRVEAALTALRAGQGVLVVDDEDRENEGDLIYSAEHLTQEQMALLIRECSGIVCLCLTDERVKQLELPPMV--EDNSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKAAIADDAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLMKLAGLKPAGVLCEVTNVNGTMARLPEIIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIB3_YEAST (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Saccharomyces cerevisiae GN=RIB3 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 83/187 (44.39%), Postives = 111/187 (59.36%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPL----MVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDD--GSMARLPKLREF 693 F+ I +AIE +Q KF LI AA+ + E MAF+V+H +G VC M ++LDLPL M + +D++ TA+T+TVD GTTTG+SA DR+ T LA S P F +PGHI PL+ +GGVL+R GHTEA VDL L+G P AV+ E+V+DD G+M RL + F Sbjct: 2 FTPIDQAIEHFKQNKFVIVMDDAGRENEGDLICAAENVSTEQMAFLVRHSSGYVCAPMTNAIADKLDLPLLRTGMKFESNDDDRHGTAYTITVDVAQGTTTGISAHDRSMTCRALADSSSTPKSFLKPGHICPLRAADGGVLQRRGHTEAGVDLCKLSGLSPVAVIGELVNDDEQGTMMRLNDCQAF 188
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_VIBHA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Vibrio harveyi GN=ribB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35 Identity = 80/178 (44.94%), Postives = 108/178 (60.67%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + AIE ++ G LI +AQ T MA +++ G+GIVC+ + E LDLP MV K+N K TAFTV+++AK G TTGVSA+DR TTV T D++P D RPGH+FPL + GVL R GHTE ++DL LA P+ +LCE+ + DG+MA+LP+ EF Sbjct: 17 VERAIEALKNGLGVLLMDDEDRENEGDLIFSAQHLTEAQMALMIREGSGIVCLCLTEERANWLDLPPMV--KDNCSKNQTAFTVSIEAKEGVTTGVSAKDRVTTVKTATYFDAQPEDLARPGHVFPLVAKTNGVLARRGHTEGTIDLMYLANLVPSGILCELTNPDGTMAKLPETIEF 192
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHEB8 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella baltica (strain OS185) GN=ribB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35 Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + + +RQG+ LI AA+ T MA +++ +GIVC+ + E ++ L+LP MV + N + TAFTV+++A G TTGVSA DR TT+ + ++KP D RPGH++PL+ + GGVL R GHTE ++DL LAG PA VLCEV + DG+MARLP++ F Sbjct: 16 VEAGLNALRQGQGVLVVDDEDRENEGDLIFAAETLTNAQMAMLIRECSGIVCLCLPDEKIKALELPAMV--EHNSSQYGTAFTVSIEATVGVTTGVSAADRVTTIKAAIADNAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLVQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHEB5 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ribB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35 Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 + + +RQG+ LI AA+ T MA +++ +GIVC+ + E ++ L+LP MV + N + TAFTV+++A G TTGVSA DR TT+ + ++KP D RPGH++PL+ + GGVL R GHTE ++DL LAG PA VLCEV + DG+MARLP++ F Sbjct: 16 VEAGLNALRQGQGVLVVDDEDRENEGDLIFAAETLTNAQMAMLIRECSGIVCLCLPDEKIKALELPAMV--EHNSSQYGTAFTVSIEATVGVTTGVSAADRVTTIKAAIADNAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLVQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191 The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bpback to top |