CX295133

Overview
NameCX295133
Unique NameCX295133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAM (Riboflavin biosynthesis protein ribBA OS=Bacillus amyloliquefaciens GN=ribBA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 78/180 (43.33%), Postives = 113/180 (62.78%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690
            F  I EA+E +++G+                +  A+ ATPE + F+  HG G++C  +  +   RLDL  MV    +  +  TAFTV++D K  T TG+SA++R+ T+  L   +S PGDF RPGHIFPL  ++GGVLKRAGHTEA+VDLA   G   A V+CE++++DG+MAR+P++ E
Sbjct:    2 FHPIEEALEALKKGEVIIVVDDEDRENEGDFVALAEHATPEVVNFMATHGRGLICTPLSEDIAGRLDLHPMVDHNTDSHE--TAFTVSIDHKL-TKTGISAQERSFTIQALLDEESVPGDFQRPGHIFPLIAKKGGVLKRAGHTEAAVDLAKACGSQGADVICEIMNEDGTMARVPEISE 178          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHEB9 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella baltica (strain OS195) GN=ribB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            +   +  +RQG+               LI AA+  T   MA +++  +GIVC+ +  E ++ L+LP MV  + N  +  TAFTV+++A  G TTGVSA DR TT+    + ++KP D  RPGH++PL+ + GGVL R GHTE ++DL  LAG  PA VLCEV + DG+MARLP++  F
Sbjct:   16 VEAGLNALRQGQGVLVVDDEDRENEGDLIFAAETLTNAQMAMLIRECSGIVCLCLPDEKVKALELPAMV--EHNSSQYGTAFTVSIEATVGVTTGVSAADRVTTIKAAIADNAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLVQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHEB2 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella baltica (strain OS223) GN=ribB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            +   +  +RQG+               LI AA+  T   MA +++  +GIVC+ +  E ++ L+LP MV  + N  +  TAFTV+++A  G TTGVSA DR TT+    + ++KP D  RPGH++PL+ + GGVL R GHTE ++DL  LAG  PA VLCEV + DG+MARLP++  F
Sbjct:   16 VEAGLNALRQGQGVLVVDDEDRENEGDLIFAAETLTNAQMAMLIRECSGIVCLCLPDEKVKALELPAMV--EHNSSQYGTAFTVSIEATVGVTTGVSAADRVTTIKAAIADNAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLVQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_CLOBH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=ribB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            + +A+E+++ GK               LI  A+  T   M  +++  +GIVC+ +  + +++L L  MV    N     TAFT++++AK G TTGVSA DR TT+LT    D KP D   PGH+FPL+ R GGVL R GHTE +VDL  LAG++PA +LCE+ + DG+MARLP++  F
Sbjct:   16 VEKALENLKNGKGVLLVDDENRENEGDLIFPAETITVPQMVMLIRECSGIVCLCLTDKKVKKLGLTQMV--HNNTCTYETAFTISIEAKEGVTTGVSAADRVTTILTAVKDDCKPEDLCHPGHVFPLRARAGGVLTRPGHTEGTVDLMRLAGYNPAGILCELTNPDGTMARLPQIINF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_CLOB1 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=ribB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            + +A+E+++ GK               LI  A+  T   M  +++  +GIVC+ +  + +++L L  MV    N     TAFT++++AK G TTGVSA DR TT+LT    D KP D   PGH+FPL+ R GGVL R GHTE +VDL  LAG++PA +LCE+ + DG+MARLP++  F
Sbjct:   16 VEKALENLKNGKGVLLVDDENRENEGDLIFPAETITVPQMVMLIRECSGIVCLCLTDKKVKKLGLTQMV--HNNTCTYETAFTISIEAKEGVTTGVSAADRVTTILTAVKDDCKPEDLCHPGHVFPLRARAGGVLTRPGHTEGTVDLMRLAGYNPAGILCELTNPDGTMARLPQIINF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_PROA2 (Riboflavin biosynthesis protein ribBA OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=ribBA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 83/177 (46.89%), Postives = 108/177 (61.02%), Query Frame = 1
Query:  157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDA-KHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684
            SI  AIED++ GK                I AA   TPE + FI K   G++CV++  +  + L L  MV +  +  +  T FTV+VDA   G TTG+SA DR  T+  LA   S   +F+RPGHIFPL+  +GGVL+R GHTEA+VDLA LAG  P  +LCE++ DDGSMARLP+L
Sbjct:    8 SIESAIEDLKNGKLIIVIDDEDREDEGDFIAAADKVTPEMVNFITKEARGLLCVAVTMDRAKELQLDPMVQRNTSQHE--TNFTVSVDALAEGVTTGISAFDRYMTIKMLADPVSHADNFSRPGHIFPLRAMDGGVLRRVGHTEAAVDLAELAGSTPVGLLCEILHDDGSMARLPEL 182          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLMU (Riboflavin biosynthesis protein ribBA OS=Chlamydia muridarum GN=ribBA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 84/182 (46.15%), Postives = 107/182 (58.79%), Query Frame = 1
Query:  148 GFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            G +S+ +AI+DI  G F              LI+A +  + E MAF++ H TGIVC S+  E    LDLP MV  +EN     TAFTV+VDA  G TTGVSA DR  TV  L+   S    F RPGH+FPL  + GGV+KR GHTEAS+DL  LAG  P  +  E+V+ D SM R  ++ +F
Sbjct:    7 GIASVQQAIKDIADGNFVIVIDRESRENEGDLILAGEKVSAEKMAFLLSHTTGIVCASVTREQARVLDLPAMV--QENQCAFKTAFTVSVDASSGITTGVSAADRTRTVQLLSDPTSISQSFVRPGHVFPLVSQPGGVVKRPGHTEASMDLMRLAGMYPCGIFAELVNADHSMMRQQQILDF 186          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACSU (Riboflavin biosynthesis protein ribBA OS=Bacillus subtilis GN=ribBA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 79/180 (43.89%), Postives = 113/180 (62.78%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690
            F  I EA++ +++G+                +  A+ ATPE + F+  HG G++C  +  E  +RLDL  MV  + N +   TAFTV++D +  T TG+SA++R+ TV  L    S P DF RPGHIFPL  ++GGVLKRAGHTEA+VDLA   G   A V+CE++++DG+MAR+P+L E
Sbjct:    2 FHPIEEALDALKKGEVIIVVDDEDRENEGDFVALAEHATPEVINFMATHGRGLICTPLSEEIADRLDLHPMV--EHNTDSHHTAFTVSIDHRE-TKTGISAQERSFTVQALLDSKSVPSDFQRPGHIFPLIAKKGGVLKRAGHTEAAVDLAEACGSPGAGVICEIMNEDGTMARVPELIE 178          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_VIBSL (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Vibrio splendidus (strain LGP32) GN=ribB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.835e-35
Identity = 77/183 (42.08%), Postives = 112/183 (61.20%), Query Frame = 1
Query:  145 EGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            E  + +  A++ +R+G+               +I + +  T   MA +++  +GIVC+ +  E   +L+LP MV   +N+    TAFTVT++AK G TTGVSA DR TT+ T A+  +KP D  RPGH+FPL+ R+GGVL R GHTE +VDL  +AG   A VLCEV + DG+MA+ P++  F
Sbjct:   12 EPITRVENALQALREGRGVLLLDDEDRENEGDIIYSVEHLTNAQMALMIRECSGIVCLCLTDEQANQLELPPMVV--DNNSANQTAFTVTIEAKVGVTTGVSAADRVTTIKTAANPTAKPTDLARPGHVFPLRARKGGVLARRGHTEGTVDLMQMAGLQSAGVLCEVTNPDGTMAKAPEIVAF 192          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHEON (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shewanella oneidensis GN=ribB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.315e-35
Identity = 75/151 (49.67%), Postives = 102/151 (67.55%), Query Frame = 1
Query:  241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            LI AA+  T   MA +++  +GIVC+ +  E ++ L LP MV  + N  +  TAFTV+++AK G TTGVSA DR TT+ T  +  +KP D  RPGH++PL+ + GGVL R GHTE ++DL  LAG  PA VLCEV + DG+MARLP++  F
Sbjct:   43 LIFAAESLTNAQMAMLIRECSGIVCLCLPDEKVKALALPPMV--ENNSSQYGTAFTVSIEAKVGVTTGVSAADRVTTIKTAIADHAKPSDLARPGHVYPLRAQPGGVLTRRGHTEGTIDLMQLAGLKPAGVLCEVTNPDGTMARLPEIIAF 191          
The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
RIBBA_BACAM2.835e-3543.33Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBB_SHEB93.702e-3542.703,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHEB23.702e-3542.703,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_CLOBH3.702e-3542.703,4-dihydroxy-2-butanone 4-phosphate synthase OS=C... [more]
RIBB_CLOB13.702e-3542.703,4-dihydroxy-2-butanone 4-phosphate synthase OS=C... [more]
RIBBA_PROA23.702e-3546.89Riboflavin biosynthesis protein ribBA OS=Prostheco... [more]
RIBBA_CHLMU3.702e-3546.15Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]
RIBBA_BACSU3.702e-3543.89Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBB_VIBSL4.835e-3542.083,4-dihydroxy-2-butanone 4-phosphate synthase OS=V... [more]
RIBB_SHEON6.315e-3549.673,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionC05068H10SK DroRLeaf1 Citrus clementina cDNA clone C05068H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bp
GAAAGTACTGGTGCTCATGATCAATTGGAGGGGATTGAGTTACAACCGGA
TGCAATAGCATTTGGAGCACTTGCACCAGATACCGCTCCCACAACTTTTG
GATTTTCCAGTGATGATAGTGAATTTGATTTGGATAGCCCTACAGAAGGT
TTTTCTTCTATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGT
CGTGGTCGTGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGG
CAGCACAGCTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGA
ACTGGAATTGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGA
TCTTCCTTTAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTG
CATTCACAGTGACAGTGGATGCAAAACATGGAACAACCACAGGGGTCTCA
GCTCGTGATAGGGCAACAACTGTTTTGACTCTTGCTTCTAGGGATTCAAA
ACCTGGGGATTTCAATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAG
AGGGTGGAGTTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGTTGATCTT
GCTGTGCTAGCTGGATTTGACCCTGCAGCAGTTTTGTGTGAGGTTGTGGA
TGATGATGGTTCCATGGCTAGATTACCAAAGCTTCGTGAATTTTG
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