CX295133

Overview
NameCX295133
Unique NameCX295133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_CHLT3 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=ribB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.315e-35
Identity = 79/181 (43.65%), Postives = 109/181 (60.22%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F+ +  A+  +R GK               LI +A+  T   MA +++  +GIVC+ +  E ++ L LP+MV+  EN     TAFTV+++AK G  TGVSA DR  TV T  + D+KP +  RPGH+FPL+ R GGVL+R GHTEA+VDL  LAG  P  VLCE+ + DG+MA L +   F
Sbjct:   13 FTRVENALTALRSGKGILVSDSPDRENEADLIFSAEFLTETQMAMLIRECSGIVCLCLTTEKVQALALPMMVS--ENTSGFQTAFTVSIEAKTGVKTGVSAADRVRTVKTAIAADAKPEELARPGHVFPLRARTGGVLERPGHTEATVDLMRLAGLSPYGVLCELTNPDGTMANLDEAIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_BORPE (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Bordetella pertussis GN=ribB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34
Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            +  A++ +R G+               LI+AA   T   MA +++ G+GIVC+ + GE L+RL+LP MV    N  +  TAFTV+++A+ G TTGVSA DR TT+    +  ++ GD   PGH+FPL+ + GGVL R GHTE SVDLA LAG  PA VLCE+++ DG+M R   L  +
Sbjct:   21 LERALQHLRIGRPVILMDDFDRENEADLIVAADKLTVPVMAQLIRDGSGIVCLCLPGETLDRLELPPMV--DSNRSRYSTAFTVSIEAREGVTTGVSAVDRVTTIRAAIAPGARSGDVVSPGHVFPLRAQPGGVLTRRGHTEGSVDLAALAGLRPAGVLCELMNADGTMMRGASLERY 196          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_BORPA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Bordetella parapertussis GN=ribB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34
Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            +  A++ +R G+               LI+AA   T   MA +++ G+GIVC+ + GE L+RL+LP MV    N  +  TAFTV+++A+ G TTGVSA DR TT+    +  ++ GD   PGH+FPL+ + GGVL R GHTE SVDLA LAG  PA VLCE+++ DG+M R   L  +
Sbjct:   21 LERALQHLRIGRPVILMDDFDRENEADLIVAADKLTVPVMAQLIRDGSGIVCLCLPGETLDRLELPPMV--DSNRSRYSTAFTVSIEAREGVTTGVSAVDRVTTIRAAIAPGARSGDVVSPGHVFPLRAQPGGVLTRRGHTEGSVDLAALAGLRPAGVLCELMNADGTMMRGASLERY 196          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_BORBR (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Bordetella bronchiseptica GN=ribB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34
Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            +  A++ +R G+               LI+AA   T   MA +++ G+GIVC+ + GE L+RL+LP MV    N  +  TAFTV+++A+ G TTGVSA DR TT+    +  ++ GD   PGH+FPL+ + GGVL R GHTE SVDLA LAG  PA VLCE+++ DG+M R   L  +
Sbjct:   21 LERALQHLRIGRPVILMDDFDRENEADLIVAADKLTVPVMAQLIRDGSGIVCLCLPGETLDRLELPPMV--DSNRSRYSTAFTVSIEAREGVTTGVSAVDRVTTIRAAIAPGARSGDVVSPGHVFPLRAQPGGVLTRRGHTEGSVDLAALAGLRPAGVLCELMNADGTMMRGASLERY 196          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_DESDG (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Desulfovibrio desulfuricans (strain G20) GN=ribB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.407e-34
Identity = 76/178 (42.70%), Postives = 109/178 (61.24%), Query Frame = 1
Query:  160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            +  A++ +R+G                LI AA+  +   MA +++  +GIVC+ +  E +  L LP+MV  + N  +  TAFTV+++A  G +TGVSA DR  T+    + D+ P D  RPGH+FPL+ R GGVL+R GHTEA+VDL  LAG  P  VLCEV + DG+MARLP++ +F
Sbjct:   16 VEAALDALRRGHGVLVTDDEDRENEGDLIFAAETLSDSQMAMLIRECSGIVCLCLTDEKVRALGLPMMV--ENNSSQYQTAFTVSIEASCGVSTGVSAADRVCTIQAAIADDACPSDLCRPGHVFPLRARPGGVLERRGHTEATVDLMRLAGLKPCGVLCEVTNPDGTMARLPQIVDF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLTR (Riboflavin biosynthesis protein ribBA OS=Chlamydia trachomatis GN=ribBA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.407e-34
Identity = 79/182 (43.41%), Postives = 108/182 (59.34%), Query Frame = 1
Query:  148 GFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            G +S+ +AI+D+ +GKF              LI+A +  + E M+F++ H TGIVC S+  E  + LDLP MV  ++N     TAFTV+VDA  G TTGVSA DR  TV  LA   +    F RPGH+FPL  + GG ++R GHTEA++DL  LAG  P  +  E+V+ D SM R  ++  F
Sbjct:    7 GIASVQQAIKDVAEGKFVIVIDAASRENEGDLILAGEKVSTEKMSFLLSHTTGIVCASLSREQAKSLDLPAMV--QDNQCAFKTAFTVSVDASSGVTTGVSASDRTRTVQLLADPAATAESFVRPGHVFPLISQPGGAVQRPGHTEAAMDLMRLAGMQPCGIFAELVNPDHSMMRQQQVLAF 186          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_DESVV (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ribB PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.134e-34
Identity = 75/151 (49.67%), Postives = 99/151 (65.56%), Query Frame = 1
Query:  241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            LI AA+  TP  MA +++  +GIVC+ +  E + RL LP+MVA   N   + TAFT++++A  G TTGVSA DR  TV       + PG    PGH+FPL+   GGVL+R GHTEA+VDL  LAG  P  VLCE+ + DG+MARLP+L +F
Sbjct:   43 LIFAAETLTPAQMAMMIRECSGIVCLCLPEERVSRLGLPMMVAH--NTSSMGTAFTISIEAAEGVTTGVSAADRVRTVQAAIDDAACPGCLRSPGHVFPLRASPGGVLERRGHTEATVDLMRLAGLKPYGVLCELTNPDGTMARLPQLVDF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_DESVH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ribB PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.134e-34
Identity = 75/151 (49.67%), Postives = 99/151 (65.56%), Query Frame = 1
Query:  241 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            LI AA+  TP  MA +++  +GIVC+ +  E + RL LP+MVA   N   + TAFT++++A  G TTGVSA DR  TV       + PG    PGH+FPL+   GGVL+R GHTEA+VDL  LAG  P  VLCE+ + DG+MARLP+L +F
Sbjct:   43 LIFAAETLTPAQMAMMIRECSGIVCLCLPEERVSRLGLPMMVAH--NTSSMGTAFTISIEAAEGVTTGVSAADRVRTVKAAIDDAACPGCLRSPGHVFPLRASPGGVLERRGHTEATVDLMRLAGLKPYGVLCELTNPDGTMARLPQLVDF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIB3_MAGGR (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Magnaporthe grisea GN=RIB3 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.134e-34
Identity = 78/173 (45.09%), Postives = 104/173 (60.12%), Query Frame = 1
Query:  139 PTEGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKH-GTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDD 654
            P   F +IP+ I+  + G+F              LI+AA+  T E MAF+V+H +G++C  +  E    LDLP MV    N +   TA+TV+VDA+H  TTTG+SA DRA     LA+ D++P  F RPGH+FPL+   GGV  R GHTEA V+L  LAG  P AV+ E+VDD
Sbjct:    8 PKSNFDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--NADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDD 178          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_PHOPR (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Photobacterium profundum GN=ribB PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.346e-34
Identity = 75/181 (41.44%), Postives = 108/181 (59.67%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +   +  IR+G+               +I AA+  T E MA +++  +GIVC+ +  E +++L+LP+MV    +  +  T FTVT++A  G TTGVSA DR TT+ T  +  + P D N PGH+FPLK    GVL R GHTEA++DL  L+G  P  VLCE+ + DG+MARLP++  F
Sbjct:   13 FERVEAGLTAIREGRGVLVVDDEDRENEGDIIFAAETLTSEQMALMIRECSGIVCLCLTDERVKQLELPMMVENNTSANE--TGFTVTIEAAKGVTTGVSAADRVTTIKTAIADGAVPADLNHPGHVFPLKANADGVLGRRGHTEATIDLMRLSGLKPYGVLCELTNIDGTMARLPEVIVF 191          
The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
RIBB_CHLT36.315e-3543.653,4-dihydroxy-2-butanone 4-phosphate synthase OS=C... [more]
RIBB_BORPE1.077e-3443.823,4-dihydroxy-2-butanone 4-phosphate synthase OS=B... [more]
RIBB_BORPA1.077e-3443.823,4-dihydroxy-2-butanone 4-phosphate synthase OS=B... [more]
RIBB_BORBR1.077e-3443.823,4-dihydroxy-2-butanone 4-phosphate synthase OS=B... [more]
RIBB_DESDG1.407e-3442.703,4-dihydroxy-2-butanone 4-phosphate synthase OS=D... [more]
RIBBA_CHLTR1.407e-3443.41Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]
RIBB_DESVV3.134e-3449.673,4-dihydroxy-2-butanone 4-phosphate synthase OS=D... [more]
RIBB_DESVH3.134e-3449.673,4-dihydroxy-2-butanone 4-phosphate synthase OS=D... [more]
RIB3_MAGGR3.134e-3445.093,4-dihydroxy-2-butanone 4-phosphate synthase OS=M... [more]
RIBB_PHOPR5.346e-3441.443,4-dihydroxy-2-butanone 4-phosphate synthase OS=P... [more]

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Properties
Property NameValue
Genbank descriptionC05068H10SK DroRLeaf1 Citrus clementina cDNA clone C05068H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bp
GAAAGTACTGGTGCTCATGATCAATTGGAGGGGATTGAGTTACAACCGGA
TGCAATAGCATTTGGAGCACTTGCACCAGATACCGCTCCCACAACTTTTG
GATTTTCCAGTGATGATAGTGAATTTGATTTGGATAGCCCTACAGAAGGT
TTTTCTTCTATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGT
CGTGGTCGTGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGG
CAGCACAGCTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGA
ACTGGAATTGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGA
TCTTCCTTTAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTG
CATTCACAGTGACAGTGGATGCAAAACATGGAACAACCACAGGGGTCTCA
GCTCGTGATAGGGCAACAACTGTTTTGACTCTTGCTTCTAGGGATTCAAA
ACCTGGGGATTTCAATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAG
AGGGTGGAGTTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGTTGATCTT
GCTGTGCTAGCTGGATTTGACCCTGCAGCAGTTTTGTGTGAGGTTGTGGA
TGATGATGGTTCCATGGCTAGATTACCAAAGCTTCGTGAATTTTG
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