CX295133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAS (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MSSA476) GN=ribBA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F +I A+ ++ G+ L+ + + F+ K G++C + + +RLDL MV +N + T FTV++D TTTG+SA +R T L S+ DFNRPGH+FPL ++ GVL R GHTEA+VDLA L G PA V+CE+++DDG+MA+ L++F Sbjct: 3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKF 180
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAR (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MRSA252) GN=ribBA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F +I A+ ++ G+ L+ + + F+ K G++C + + +RLDL MV +N + T FTV++D TTTG+SA +R T L S+ DFNRPGH+FPL ++ GVL R GHTEA+VDLA L G PA V+CE+++DDG+MA+ L++F Sbjct: 3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKF 180
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAN (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain N315) GN=ribBA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27 Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F +I A+ ++ G+ L+ + + F+ K G++C + + +RLDL MV +N + T FTV++D TTTG+SA +R T L S+ DFNRPGH+FPL ++ GVL R GHTEA+VDLA L G PA V+CE+++DDG+MA+ L+ F Sbjct: 3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQNF 180
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAM (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ribBA PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27 Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F +I A+ ++ G+ L+ + + F+ K G++C + + +RLDL MV +N + T FTV++D TTTG+SA +R T L S+ DFNRPGH+FPL ++ GVL R GHTEA+VDLA L G PA V+CE+++DDG+MA+ L+ F Sbjct: 3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQNF 180
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAC (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain COL) GN=ribBA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F +I A+ ++ G+ L+ + + F+ K G++C + + +RLDL MV +N + T FTV++D TTTG+SA +R T L S+ DFNRPGH+FPL ++ GVL R GHTEA+VDLA L G PA V+CE+++DDG+MA+ L++F Sbjct: 3 FDNIDSALMALKNGEPIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKF 180
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_STAHJ (Riboflavin biosynthesis protein ribBA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ribBA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = 1 Query: 151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTT-TGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693 F I +A+ +++G+ L+ Q + F+ K G G++C + +DL L LM + N + T FTV++D H TT TG+SA DR T L + +S P DF++PGH+FPL +E GVL+R GHTEA+VDLA L PA V+CE++++DG+MA+ +L F Sbjct: 3 FDEIKDALNALKRGESIIVVDDEDRENEGDLVAITQWMNDNTINFMAKEGRGLICAPIS-KDLA-LKFNLMPMVEHNTDGFGTNFTVSID--HATTSTGISAFDRMATARALINPESTPEDFHKPGHLFPLIAKENGVLERTGHTEAAVDLAKLTKAAPAGVICEIMNEDGTMAKGEQLEAF 180
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_METTH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Methanobacterium thermoautotrophicum GN=ribB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 1 Query: 160 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKEN------------------DEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLAS-----RDSKPGD-FNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDD 654 I EA++ +R+G+ +I+AA+ PE + + G++CV + E+ E+L +P M E DEK +AF++TV+ + T TG++ DRA T+ LA R GD F PGH+ L+ +G VL+R GHTE S+ L +AG AV CE++DD Sbjct: 7 IQEALKALRRGEIVLVFDADNRERETDMIVAAEKIKPEHIRIMRNDAGGLICVPVSWENSEKLGIPYMTDIMEEASGRYPVLGKLSPHDIPYDEK--SAFSITVNHRK-TFTGITDNDRALTIGELAGICRDDRHESFGDLFRSPGHVTLLRAADGHVLRRGGHTEMSIALMEMAGLTGVAVCCEMMDD 192
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_METJA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Methanocaldococcus jannaschii GN=ribB PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 57/194 (29.38%), Postives = 100/194 (51.55%), Query Frame = 1 Query: 154 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMV------AQKEN------------DEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLAS--RDSKPGDFNR----PGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGS 663 +++ +AIE +++G+ +++A+Q TPE + + K G++C ++ + +L +P MV +QK DEK ++F++T++ + T TG++ DRA T+ LA ++ + DF + PGH+ L+ EG V R GHTE +V LA LA P +CE++ DDG+ Sbjct: 2 NNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQKFKVLRELYPNDIPYDEK--SSFSITINHRK-TFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGHVTLLRAAEGLVKNRQGHTEMTVALAELANLVPITTICEMMGDDGN 192
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_METAC (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Methanosarcina acetivorans GN=ribB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13 Identity = 55/200 (27.50%), Postives = 91/200 (45.50%), Query Frame = 1 Query: 148 GFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLM----------------VAQKENDEKLCTAFTVTVDAKH-GTTTGVSARDRATTVLTLASRDSKP---------GDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMA 669 G +I A+E +R GK L++ A+ T + + ++ K G++CV++ ++L LP M V +K+ D K + + ++ H T TG+ +RA T+ + K +F PGH+ L+ EG + +R G TE SV LA +AG PA V+CE++DD+ A Sbjct: 13 GNENINRALEVLRAGKMIQIYDSDSREGETDLVIPAKAVTYKDVKWMRKDAGGLICVAVDPVASKQLKLPFMADLVREASRTSESLGEVVEKDGDLKYDSHSSFSIWVNHRDTRTGIPDLERALTIRKIGEITEKSLSGNGIRFGNEFRTPGHVALLRAAEGLLDERMGQTELSVALARMAGITPAMVVCEMLDDESGRA 212
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_METMA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Methanosarcina mazei GN=ribB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 56/197 (28.43%), Postives = 91/197 (46.19%), Query Frame = 1 Query: 157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLM----------------VAQKENDEKLCTAFTVTVDAKH-GTTTGVSARDRATTVLTLA--SRDSKPG-------DFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMA 669 +I A+E +R GK L++ A+ T + ++ K G++CV++ ++L LP M V +K+ D K + ++ H T TG+ +RA T+ + + +S G +F PGH+ L+ EG + +R G TE SV LA +AG PA V+CE++DDD A Sbjct: 16 NINRALEALRAGKMIQIYDSDSREGETDLVIPAKAVTYTDVKWMRKDAGGLICVAVDPVASKQLKLPFMADLVREASKTSDSLGEVVEKDGDLKYDAHSSFSLWVNHRDTRTGIPDIERALTIRKIGEITEESLSGNGVRFGNEFRTPGHVALLRAAEGLLDERMGQTELSVALARMAGITPAMVVCEMLDDDSGKA 212 The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bpback to top |