CX295133

Overview
NameCX295133
Unique NameCX295133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_ECO45 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.927e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_ECO27 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.927e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHISS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella sonnei (strain Ss046) GN=ribB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHIFL (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella flexneri GN=ribB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHIF8 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella flexneri serotype 5b (strain 8401) GN=ribB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHIDS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ribB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHIBS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=ribB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SHIB3 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ribB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_ECOSE (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli (strain SE11) GN=ribB PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
[Close]
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_ECOLI (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli (strain K12) GN=ribB PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  EF
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEF 191
The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
RIBB_ECO452.927e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO272.927e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_SHISS3.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIFL3.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIF83.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIDS3.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIBS3.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIB33.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_ECOSE3.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECOLI3.822e-4045.863,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]

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Properties
Property NameValue
Genbank descriptionC05068H10SK DroRLeaf1 Citrus clementina cDNA clone C05068H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bp
GAAAGTACTGGTGCTCATGATCAATTGGAGGGGATTGAGTTACAACCGGA
TGCAATAGCATTTGGAGCACTTGCACCAGATACCGCTCCCACAACTTTTG
GATTTTCCAGTGATGATAGTGAATTTGATTTGGATAGCCCTACAGAAGGT
TTTTCTTCTATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGT
CGTGGTCGTGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGG
CAGCACAGCTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGA
ACTGGAATTGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGA
TCTTCCTTTAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTG
CATTCACAGTGACAGTGGATGCAAAACATGGAACAACCACAGGGGTCTCA
GCTCGTGATAGGGCAACAACTGTTTTGACTCTTGCTTCTAGGGATTCAAA
ACCTGGGGATTTCAATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAG
AGGGTGGAGTTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGTTGATCTT
GCTGTGCTAGCTGGATTTGACCCTGCAGCAGTTTTGTGTGAGGTTGTGGA
TGATGATGGTTCCATGGCTAGATTACCAAAGCTTCGTGAATTTTG
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