CX295133

Overview
NameCX295133
Unique NameCX295133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig688 contig Ccv1_Contig688:435..1131. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC2 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain G9842) GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 89/180 (49.44%), Postives = 117/180 (65.00%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690
            F  I EA+ED++QGK                I  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L E
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQELLNPASKGTDFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAKLCGAEPAGVICEIINEDGTMARVPDLIE 178          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAN (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 88/178 (49.44%), Postives = 116/178 (65.17%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684
            F  I EA+ED++QGK                I  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQQLLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAQLCGAEPAGVICEIINEDGTMARVPDL 176          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAH (Riboflavin biosynthesis protein ribBA OS=Bacillus thuringiensis (strain Al Hakam) GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 88/178 (49.44%), Postives = 116/178 (65.17%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684
            F  I EA+ED++QGK                I  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQQLLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAQLCGAEPAGVICEIINEDGTMARVPDL 176          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAC (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 88/178 (49.44%), Postives = 116/178 (65.17%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684
            F  I EA+ED++QGK                I  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQQLLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAQLCGAEPAGVICEIINEDGTMARVPDL 176          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACAA (Riboflavin biosynthesis protein ribBA OS=Bacillus anthracis (strain A0248) GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 88/178 (49.44%), Postives = 116/178 (65.17%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684
            F  I EA+ED++QGK                I  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQQLLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAQLCGAEPAGVICEIINEDGTMARVPDL 176          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGL (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.520e-40
Identity = 92/181 (50.83%), Postives = 117/181 (64.64%), Query Frame = 1
Query:  157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVV--DDDGSMARLPKLREF 693
            S+ EAI DI  GK               +I AA+LATPE +AF+V++ +G +C  +  +D +RLDLP M A   N +   TA+TVTVDA  GTT G+SA DRA T+  LA  ++   DF RPGH+ PL+ REGGVL RAGHTEA+VDLA  AG  PA V+CEVV  +D   MAR+P+LR F
Sbjct:   13 SVEEAIADIAAGKAVVVVDDEDRENEGDIIFAAELATPELVAFMVRYSSGYICAPLTAKDADRLDLPPMTAH--NQDARGTAYTVTVDANTGTT-GISATDRAHTLRLLADPEADRTDFTRPGHVVPLRAREGGVLVRAGHTEAAVDLARAAGLRPAGVICEVVSEEDPTGMARVPELRRF 190          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_CORGB (Riboflavin biosynthesis protein ribBA OS=Corynebacterium glutamicum (strain R) GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.520e-40
Identity = 92/181 (50.83%), Postives = 117/181 (64.64%), Query Frame = 1
Query:  157 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVV--DDDGSMARLPKLREF 693
            S+ EAI DI  GK               +I AA+LATPE +AF+V++ +G +C  +  +D +RLDLP M A   N +   TA+TVTVDA  GTT G+SA DRA T+  LA  ++   DF RPGH+ PL+ REGGVL RAGHTEA+VDLA  AG  PA V+CEVV  +D   MAR+P+LR F
Sbjct:   13 SVEEAIADIAAGKAVVVVDDEDRENEGDIIFAAELATPELVAFMVRYSSGYICAPLTAKDADRLDLPPMTAH--NQDARGTAYTVTVDANTGTT-GISATDRAHTLRLLADPEADRTDFTRPGHVVPLRAREGGVLVRAGHTEAAVDLARAAGLRPAGVICEVVSEEDPTGMARVPELRRF 190          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BREBN (Riboflavin biosynthesis protein ribBA OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ribBA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.520e-40
Identity = 90/180 (50.00%), Postives = 115/180 (63.89%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690
            F SI EA+ED+RQGK                +  A+ ATPE + F+V HG G+VCV +  E   RL L  MV    N +K  TAFTV++D +  T TG+SA +R+ TVL +        DF RPGHIFPL  + GGVL+RAGHTEA+VDLA LAG  PA V+CE++++DGSMARLP+L E
Sbjct:    2 FHSIEEALEDLRQGKAVIVVDDEDRENEGDFVCMAEAATPEMINFMVTHGRGLVCVPVTEEHATRLQLAPMV--NANTDKQGTAFTVSID-EGSTNTGISAHERSQTVLAMLDEQKDADDFRRPGHIFPLIAKAGGVLRRAGHTEAAVDLARLAGGIPAGVICEIMNEDGSMARLPQLVE 178          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALPK (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=ribB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40
Identity = 82/181 (45.30%), Postives = 113/181 (62.43%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A++ T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAEIMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALPA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi A GN=ribB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40
Identity = 82/181 (45.30%), Postives = 113/181 (62.43%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A++ T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAEIMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
RIBBA_BACC24.992e-4049.44Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAN4.992e-4049.44Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAH4.992e-4049.44Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAC4.992e-4049.44Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACAA4.992e-4049.44Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_CORGL6.520e-4050.83Riboflavin biosynthesis protein ribBA OS=Corynebac... [more]
RIBBA_CORGB6.520e-4050.83Riboflavin biosynthesis protein ribBA OS=Corynebac... [more]
RIBBA_BREBN6.520e-4050.00Riboflavin biosynthesis protein ribBA OS=Brevibaci... [more]
RIBB_SALPK8.516e-4045.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPA8.516e-4045.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionC05068H10SK DroRLeaf1 Citrus clementina cDNA clone C05068H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bp
GAAAGTACTGGTGCTCATGATCAATTGGAGGGGATTGAGTTACAACCGGA
TGCAATAGCATTTGGAGCACTTGCACCAGATACCGCTCCCACAACTTTTG
GATTTTCCAGTGATGATAGTGAATTTGATTTGGATAGCCCTACAGAAGGT
TTTTCTTCTATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGT
CGTGGTCGTGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGG
CAGCACAGCTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGA
ACTGGAATTGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGA
TCTTCCTTTAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTG
CATTCACAGTGACAGTGGATGCAAAACATGGAACAACCACAGGGGTCTCA
GCTCGTGATAGGGCAACAACTGTTTTGACTCTTGCTTCTAGGGATTCAAA
ACCTGGGGATTTCAATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAG
AGGGTGGAGTTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGTTGATCTT
GCTGTGCTAGCTGGATTTGACCCTGCAGCAGTTTTGTGTGAGGTTGTGGA
TGATGATGGTTCCATGGCTAGATTACCAAAGCTTCGTGAATTTTG
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