CX295133

Overview
NameCX295133
Unique NameCX295133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCR (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ribBA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40
Identity = 88/180 (48.89%), Postives = 117/180 (65.00%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690
            F  I EA+ED+++GK                I  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L E
Sbjct:    2 FHRIEEALEDLKKGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQELLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAKLCGAEPAGVICEIINEDGTMARVPDLIE 178          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC4 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain B4264) GN=ribBA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40
Identity = 88/180 (48.89%), Postives = 117/180 (65.00%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 690
            F  I EA+ED+++GK                I  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L E
Sbjct:    2 FHRIEEALEDLKKGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQELLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAKLCGAEPAGVICEIINEDGTMARVPDLIE 178          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACC0 (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus (strain AH820) GN=ribBA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.112e-39
Identity = 87/178 (48.88%), Postives = 116/178 (65.17%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684
            F  I EA+ED++QGK                +  A+  TPE + F++ HG G+VCV +     ERL L  MV+   N +   TAFTV++D    TTTG+SA +RATT+  L +  SK  DFNRPGHIFPL  +EGGVL+RAGHTEA+VDLA L G +PA V+CE++++DG+MAR+P L
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFMALAEYITPETINFMITHGRGLVCVPITEGYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQQLLNPASKGADFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAQLCGAEPAGVICEIINEDGTMARVPDL 176          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBBA_BACCN (Riboflavin biosynthesis protein ribBA OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ribBA PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39
Identity = 86/178 (48.31%), Postives = 115/178 (64.61%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKL 684
            F  I EA+ED++QGK                +  A+  TPE + F++ HG G+VCV +     +RL L  MV+Q  N +   TAFTV++D    TTTG+SA +RATTV  L +  SK  DFNRPGHIFPL  ++GGVL+RAGHTEA+VDLA L G +P  V+CE++ +DG+MAR+P L
Sbjct:    2 FHRIEEALEDLKQGKVIIVCDDKNRENEGDFLALAEYITPETINFMITHGRGLVCVPLPEHYAKRLQLEPMVSQ--NTDSHHTAFTVSID-HISTTTGISAHERATTVRELLNPSSKGSDFNRPGHIFPLIAKDGGVLRRAGHTEAAVDLAKLCGTEPVGVICEIIKEDGTMARVPDL 176          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALTY (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella typhimurium GN=ribB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALTI (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella typhi GN=ribB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALSV (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=ribB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALPC (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi C (strain RKS4594) GN=ribB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALPB (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ribB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
BLAST of CX295133 vs. ExPASy Swiss-Prot
Match: RIBB_SALNS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella newport (strain SL254) GN=ribB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.897e-39
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 1
Query:  151 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREF 693
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+   F
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAF 191          
The following BLAST results are available for this feature:
BLAST of CX295133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
RIBBA_BACCR8.516e-4048.89Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC48.516e-4048.89Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACC01.112e-3948.88Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_BACCN1.453e-3948.31Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBB_SALTY1.897e-3945.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALTI1.897e-3945.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALSV1.897e-3945.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPC1.897e-3945.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPB1.897e-3945.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALNS1.897e-3945.303,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionC05068H10SK DroRLeaf1 Citrus clementina cDNA clone C05068H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295133 ID=CX295133; Name=CX295133; organism=Citrus clementina; type=EST; length=695bp
GAAAGTACTGGTGCTCATGATCAATTGGAGGGGATTGAGTTACAACCGGA
TGCAATAGCATTTGGAGCACTTGCACCAGATACCGCTCCCACAACTTTTG
GATTTTCCAGTGATGATAGTGAATTTGATTTGGATAGCCCTACAGAAGGT
TTTTCTTCTATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGT
CGTGGTCGTGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGG
CAGCACAGCTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGA
ACTGGAATTGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGA
TCTTCCTTTAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTG
CATTCACAGTGACAGTGGATGCAAAACATGGAACAACCACAGGGGTCTCA
GCTCGTGATAGGGCAACAACTGTTTTGACTCTTGCTTCTAGGGATTCAAA
ACCTGGGGATTTCAATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAG
AGGGTGGAGTTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGTTGATCTT
GCTGTGCTAGCTGGATTTGACCCTGCAGCAGTTTTGTGTGAGGTTGTGGA
TGATGATGGTTCCATGGCTAGATTACCAAAGCTTCGTGAATTTTG
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