CX295135

Overview
NameCX295135
Unique NameCX295135
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: INT3_ARATH (Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11
Identity = 47/170 (27.65%), Postives = 76/170 (44.71%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSP--ELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALL 505
            +GGLLFGY+ G  +GA + ++    E+   TW  L  + + + V+G++ GA +G        D  GR+  ++I                                  A   +PLYI+E  P++IRG L+S   L I  G    Y +    ++  G WR+M G+SA  A++
Sbjct:   35 IGGLLFGYNTGVIAGALLYIKEEFGEVDNKTW--LQEIIVSMTVAGAIVGAAIGGWY----NDKFGRRMSVLIADVLFLLGALVMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIRGALVSTNGLLITGGQFLSYLINLAFVHTPGTWRWMLGVSAIPAII 198          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 49/176 (27.84%), Postives = 76/176 (43.18%), Query Frame = 2
Query:    5 GGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGY----FVGSFQINAVGGWRYMYGLSAPLALLMGIGM 520
            GGLLFGYD G  +GA      P ++     NL+ V  GLV S  L GA  G++    ++D  GR++ ++                                   A    P ++AE  P++ RG +++  EL IV+G L  Y     +GS    +   WRYM  ++   A+++  GM
Sbjct:   31 GGLLFGYDTGVINGAL-----PFMATAGQLNLTPVTEGLVASSLLLGAAFGAMFGGRLSDRHGRRKTILYLALLFIAATLGCTFSPNASVMIAFRFLLGLAVGCASVTVPTFLAEISPAERRGRIVTQNELMIVIGQLLAYTFNAIIGSTMGESANVWRYMLVIATLPAVVLWFGM 201          
BLAST of CX295135 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 48/175 (27.43%), Postives = 75/175 (42.86%), Query Frame = 2
Query:    2 LGGLLFGYDIGATSGATISLQSP--ELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILSGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 520
            +GGLLFGYD G  SGA + ++     +   TW         ++VS ++ GA++G+ +     D LGR+  +++                                  A   APLYI+E  P++IRG L+S     I  G    Y +     +  G WR+M G++   ALL  + M
Sbjct:   37 IGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQ------EMIVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLITGGQFLSYLINLAFTDVTGTWRWMLGIAGIPALLQFVLM 205          
The following BLAST results are available for this feature:
BLAST of CX295135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
INT3_ARATH2.903e-1127.65Probable inositol transporter 3 OS=Arabidopsis tha... [more]
YFIG_BACSU4.952e-1127.84Putative metabolite transport protein yfiG OS=Baci... [more]
INT2_ARATH4.952e-1127.43Probable inositol transporter 2 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC05068H12SK DroRLeaf1 Citrus clementina cDNA clone C05068H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295135 ID=CX295135; Name=CX295135; organism=Citrus clementina; type=EST; length=702bp
TTTGGGAGGATTGTTGTTTGGGTATGACATTGGTGCCACCTCTGGCGCTA
CCATCTCATTGCAGTCGCCCGAGCTTAGTGGCACAACTTGGTTCAACCTT
TCGGCTGTTCAGCTTGGCCTTGTGGTCAGTGGTTCCCTTTATGGAGCTCT
TCTTGGATCCATCCTTGTCTACTCAATTGCAGATTTCCTTGGAAGAAAGC
GGGAGCTTATCATAGCTGCTGTTCTATATGCACTTGGTGCTTTGACCACT
GCCTATGCTCCTGGCCTTGGTGTTCTTTTAGTGGGACGGCTGCTCTATGG
GCTTGGCATCGGTTTGGCCATGCATGGGGCTCCTCTGTATATTGCAGAAA
CTTGCCCATCTCAGATACGTGGAACTCTTATATCTCTAAAGGAGCTCTTC
ATAGTTCTGGGAATTTTGTCGGGTTATTTTGTGGGAAGCTTCCAAATTAA
TGCAGTTGGGGGTTGGCGTTACATGTATGGGCTTAGTGCTCCTCTTGCTT
TGTTGATGGGAATAGGGATGTGGAGTCTTCCTCCATCTCCACGTTGGTTA
CTTCTCAGGGCAGTTCAAGGCAAAGGATCTTTACAAGAATACAAAGAGCA
GGCTATCTCTGCTCTAGGCAAACTAAGGAGGCGGCCTCCTGGTGACAAAC
TGTCTGAGAGACAAATAGAGATACACTTGTATCATTGAAGTCTTCCTATA
CT
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