CX295138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 8.111e-31 Identity = 68/109 (62.39%), Postives = 80/109 (73.39%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D+WL GEFITTVQQRGAA+IKARK DHIRD GTPEG +VSMGV SDG SY VP L+YSFPV +N W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 216 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAISDHIRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.059e-30 Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D WL G FITTVQQRGAA+IKARK CDH+RD GTPEG +VSMGV SDG SY VP L+YSFP+T +N W IV+GL I++FSR+K+D+TA+EL +EK Sbjct: 216 DDWLKGGFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGQFVSMGVISDGNSYGVPEDLMYSFPLTIKNKTWKIVEGLCINDFSREKMDITAKELQDEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.360e-30 Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 W E+I TVQQRGAAIIKAR A H+RDW LG+PEG WVSMGVYSDGSY + GLIYSFP C+NG+W IVQGLSIDEFS+ ++ T EL E+ Sbjct: 213 WYAEEYIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWALGSPEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLSIDEFSQARMTATETELQGER 318
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.082e-30 Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 W +FI TVQQRGAAIIKAR A DHIRDWVLGTPEG W SM V SDGSY + G+IYS+P CRNG++ IVQ L IDEFSR+K+ T +EL EE+ Sbjct: 213 WYENDFIPTVQQRGAAIIKARGASSAASAASSAIDHIRDWVLGTPEGEWTSMAVPSDGSYGIEKGIIYSYPCVCRNGDYEIVQDLEIDEFSREKMQATEKELVEER 318
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDHC_CHICK (Malate dehydrogenase, cytoplasmic OS=Gallus gallus GN=MDH1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.171e-29 Identity = 64/109 (58.72%), Postives = 79/109 (72.48%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D+WL G+FI TVQQRGAA+IKARK CDH+RD GTP G +VSMGV SDG SY VP L+YSFPV ++ W V+GL I++FSR+K+DLTA+EL+EEK Sbjct: 216 DSWLKGDFILTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPAGEFVSMGVISDGNSYGVPEDLLYSFPVVIKDKTWKFVEGLPINDFSREKMDLTAKELTEEK 324
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.813e-29 Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 W E+I TV +RGAAII+AR A DH+RDW LGT EG WVSMG+ SDGSY VP GLIY FPVT ++G++ IVQGL I EFSR K+D TA EL EE+ Sbjct: 215 WYEQEYIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.592e-29 Identity = 61/106 (57.55%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 W+ +FI TV +RGAAII AR D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 215 WIENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.592e-29 Identity = 61/106 (57.55%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 W+ +FI TV +RGAAII AR D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 215 WIENDFIPTVAKRGAAIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.691e-28 Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = -3 Query: 313 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 633 W+ EFI TV RGAAII+AR D RDW+LGTPEG WVSM V SDGSY VP GL+YS+PVT G W IV+GL +++FSR+K+D TA EL +E+A Sbjct: 214 WIENEFIPTVAGRGAAIIEARGASSAASAASATIDAARDWLLGTPEGDWVSMAVASDGSYGVPEGLMYSYPVTTSGGNWEIVEGLEVNDFSRRKMDATAAELFDERA 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.921e-28 Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAW FI TV +RGAAII+AR A DHIRDW LGT G WV+MG+ SDGSY++P G++Y FPVTC+NGE+ IV+GL ID FSR+K++ T +EL+EEK Sbjct: 222 DAWNKDTFIPTVGKRGAAIIEARGLSSAASAASAAVDHIRDWWLGT-NGEWVTMGIPSDGSYDIPEGIMYGFPVTCKNGEYEIVKGLEIDAFSREKMNNTLKELNEEK 328 The following BLAST results are available for this feature:
BLAST of CX295138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295138 ID=CX295138; Name=CX295138; organism=Citrus clementina; type=EST; length=641bpback to top |