CX295138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.096e-27 Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = -3 Query: 316 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 AW+ FI TV +RGAAII AR D RDW+LGTPEG WVSM V SDGSY VP GLI SFPVT +G+WTIV+GL ID+FSR ++D + EL++E+ Sbjct: 214 AWIEDYFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPEGNWVSMAVVSDGSYGVPEGLISSFPVTTTDGDWTIVRGLGIDDFSRGRIDKSTAELADER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.432e-27 Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 + WL +FI TVQQRG AII+AR A DHI DWVLGTP G W SM V SDGSY VP GLI SFPVTC +G + IV+GL +D FSR+++D + EL+ E+ Sbjct: 216 EQWLREDFIPTVQQRGTAIIQARGASSAASAASAAIDHIHDWVLGTPAGEWTSMAVPSDGSYGVPDGLISSFPVTCADGAYRIVEGLEVDAFSRERIDASVAELTAER 323
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.870e-27 Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = -3 Query: 316 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSI-DEFSRKKLDLTAEELSEEK 636 AW G +I VQQRGAAIIKAR A H+R WV+GT E WVSMGVYS+G Y + GLIYSFPVTC NG+W+IV G+ + +FS++K+ T +ELSEE+ Sbjct: 214 AWYEGTYIPEVQQRGAAIIKARGASSAASAANAAIAHVRTWVMGTDENDWVSMGVYSNGEYGIAKGLIYSFPVTCANGDWSIVDGVDVSSDFSKEKMAATEQELSEER 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.442e-27 Identity = 59/108 (54.63%), Postives = 72/108 (66.67%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 + WL FI TV +RGAAII+AR A DH+ DWV GTPEG W S+ + SDGSY VP GL+ SFPV RNG W IVQGL I+EFSR+++D + EL EE+ Sbjct: 213 EEWLRDTFIPTVAKRGAAIIEARGASSAASAANAAIDHVYDWVNGTPEGDWTSVALPSDGSYGVPEGLVSSFPVVSRNGSWEIVQGLEINEFSRERIDASVRELEEER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCTU (Malate dehydrogenase OS=Mycobacterium tuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.190e-27 Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 313 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 636 AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 214 AWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCTA (Malate dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.190e-27 Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 313 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 636 AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 214 AWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCBT (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.190e-27 Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 313 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 636 AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 214 AWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCBP (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.190e-27 Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 313 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 636 AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 214 AWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_MYCBO (Malate dehydrogenase OS=Mycobacterium bovis GN=mdh PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.190e-27 Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 313 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 636 AW+ EFI TV +RGAAII AR D RDW+LGTP WVSM V SDGSY VP GLI SFPVT + G WTIV GL IDEFSR ++D + EL++E++ Sbjct: 214 AWIEDEFIPTVAKRGAAIIDARGASSAASAASATIDAARDWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.441e-27 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = -3 Query: 319 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 633 W FI TV QRGAAII+AR A +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 213 WYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317 The following BLAST results are available for this feature:
BLAST of CX295138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295138 ID=CX295138; Name=CX295138; organism=Citrus clementina; type=EST; length=641bpback to top |