CX295138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.441e-27 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = -3 Query: 319 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 633 W FI TV QRGAAII+AR A +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 213 WYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_THET2 (Malate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.441e-27 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = -3 Query: 319 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 633 W FI TV QRGAAII+AR A +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 213 WYEKVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.441e-27 Identity = 62/107 (57.94%), Postives = 71/107 (66.36%), Query Frame = -3 Query: 316 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 AWL FI TV +RGAAII+AR A DHI WV GTPEG W S V SDGSY VP GLI SFPV R+G + IVQGL IDEFSR+++D + ELSEE+ Sbjct: 213 AWLADTFIPTVAKRGAAIIEARGASSAASAANAAIDHIHTWVNGTPEGDWTSAAVVSDGSYGVPEGLISSFPVVARDGRYEIVQGLEIDEFSRQRIDASVNELSEER 319
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.106e-27 Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 W ++I TV +RGAAII+AR A DH+ DW LGT +G WVSMG+ SDGSY +P GLIY FPV ++G++ IVQGL + +FSR K+D TA+EL EE+ Sbjct: 215 WYENDYIPTVAKRGAAIIEARGASSAASAASAAIDHMHDWALGTKDGEWVSMGIPSDGSYGIPEGLIYGFPVRVKDGKYEIVQGLDVSDFSRGKMDATAQELEEER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.067e-26 Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = -3 Query: 313 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 639 D W F+ TV +RGAAII+AR A DHIRDWVLGT G WV+MGV SDGSY +P G++Y PV C NGE+ V+GL ID FSR+++DLT EL EE+A Sbjct: 212 DVWNRDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGT-NGKWVTMGVPSDGSYGIPEGVMYGVPVVCENGEYKRVEGLEIDAFSRERMDLTLAELEEERA 319
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_STRCO (Malate dehydrogenase OS=Streptomyces coelicolor GN=mdh PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.700e-26 Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 + WL EFI TV +RGAAII+AR A DH+ WV GT EG W SMG+ SDGSY VP G+I SFPVT ++G + IVQGL I+EFSR ++D + +ELSEE+ Sbjct: 213 EKWLADEFIPTVAKRGAAIIEARGASSAASAANAAIDHVYTWVNGTAEGDWTSMGIPSDGSYGVPEGIISSFPVTTKDGSYEIVQGLDINEFSRARIDASVKELSEER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_PROAC (Malate dehydrogenase OS=Propionibacterium acnes GN=mdh PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.700e-26 Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 +AW+ EFI TV +RGAAII AR + +RDW+ TPEG WVSM + SDGSY VP GLI SFPVT NG+ IVQGL ID+FSR K+D +A+EL++E+ Sbjct: 211 EAWIENEFIPTVAKRGAAIIDARGASSAASAANATVECMRDWMGSTPEGDWVSMAIPSDGSYGVPEGLISSFPVTITNGKVEIVQGLDIDDFSRAKIDASAKELADER 318
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.700e-26 Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = -3 Query: 316 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 636 AW F+ TV +RGAAII+AR A DHIRDWVLG+ G WV+MG+ SDGSY +P G+IY FPVT NGE+ IVQGL IDEFSR+++ +T EL EE+ Sbjct: 217 AWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGS-NGEWVTMGIPSDGSYGIPEGVIYGFPVTTENGEYKIVQGLEIDEFSRERMTVTLNELLEER 322
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.527e-26 Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDE-FSRKKLDLTAEELSEEK 633 W G +I VQQRGAAIIKAR A H+R WVLGT E WVSMGVYS+G Y + GLIYSFP TC NG+W+IV G+ + FS++K+ T +ELSEE+ Sbjct: 215 WYEGTYIPEVQQRGAAIIKARGASSAASAANAAIAHMRTWVLGTDENDWVSMGVYSNGEYGIAKGLIYSFPCTCTNGDWSIVDGVDVSSAFSKEKMAATEQELSEER 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_ACIBY (Malate dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=mdh PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.606e-26 Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = -3 Query: 313 AWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 636 AW F+ TV +RGAAII+AR A DH+RDW LGT G WV+MGV SDGSY +P G+++ FPVT NGE+ IVQGL IDEFSR++++ T EL EE+A Sbjct: 215 AWNKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLEIDEFSRERINFTLNELEEERA 321 The following BLAST results are available for this feature:
BLAST of CX295138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295138 ID=CX295138; Name=CX295138; organism=Citrus clementina; type=EST; length=641bpback to top |