CX295138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_BURCA (Malate dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=mdh PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.750e-25 Identity = 59/108 (54.63%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D W FI TV +RGAAII+AR A DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 213 DVWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.286e-25 Identity = 55/106 (51.89%), Postives = 70/106 (66.04%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 W+ FI TV +RGAAII+AR D RDW+ G+ + WVSM V SDGSY VP GLI SFPVT ++G+W IVQGL ID+FSR K+D + EL++E+ Sbjct: 214 WIESTFIPTVAKRGAAIIEARGSSSAASAASATIDAARDWLFGSADADWVSMAVVSDGSYGVPEGLISSFPVTTKDGDWEIVQGLEIDDFSRAKIDASTAELADER 319
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.286e-25 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 + W FI TV +RGAAII+AR A DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T +EL EE+ Sbjct: 213 EEWNRNTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLQELLEER 319
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_BORPE (Malate dehydrogenase OS=Bordetella pertussis GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.286e-25 Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAW FI TV +RGAAII+AR A DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 215 DAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_BORPA (Malate dehydrogenase OS=Bordetella parapertussis GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.286e-25 Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAW FI TV +RGAAII+AR A DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 215 DAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_BORBR (Malate dehydrogenase OS=Bordetella bronchiseptica GN=mdh PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.286e-25 Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAW FI TV +RGAAII+AR A DH+RDWVLG+ G WV+MG+ SDGSY +P G+IY FPV NGE+ +++ L ID FSR++LD T +EL EE+ Sbjct: 215 DAWNRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVVTENGEYKMIKDLEIDAFSRERLDFTLKELLEER 321
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.286e-25 Identity = 59/108 (54.63%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 D W FI TV +RGAAII+AR A DH+RDWVLGT G WV+MG+ SDGSY +P +IY PVTC NGE+ V+GL ID FSR+K+D T EL EE+ Sbjct: 213 DVWNRETFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.985e-25 Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 + WL +FI TV +RGAAII+AR A DH+ WV GT +G W SMG+ SDGSY VP GLI SFPVT ++G + IVQGL I+EFSR ++D + +EL EE+ Sbjct: 213 EKWLAEDFIPTVAKRGAAIIEARGASSAASAANAAIDHVYTWVNGTADGDWTSMGIPSDGSYGVPEGLISSFPVTTKDGRYEIVQGLEINEFSRARIDASVKELEEER 320
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_RHOOB (Malate dehydrogenase OS=Rhodococcus opacus (strain B4) GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.985e-25 Identity = 53/106 (50.00%), Postives = 70/106 (66.04%), Query Frame = -3 Query: 316 WLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 633 WL G+FI TV RG+AII+AR A DH+ DWVLGTPEG W S+ + S G+Y VP GL+ SFPV +G W +V+GL ID+FSRK++D + +L E+ Sbjct: 217 WLTGDFIPTVANRGSAIIEARGTSSAASAANAAIDHVHDWVLGTPEGDWTSVALPSTGAYGVPEGLVSSFPVRSVDGAWQVVEGLEIDDFSRKRIDASVADLESER 322
BLAST of CX295138 vs. ExPASy Swiss-Prot
Match: MDH_AQUAR (Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 3.899e-25 Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = -3 Query: 316 DAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 639 DAW F+ TV +RGAAII AR A DHI DWVLGT G W +MG+ SDGSY +P G+I+ FPVT NGE+ IVQGLSID FS++++++T EL EE+ Sbjct: 215 DAWNRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTA-GKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQ 321 The following BLAST results are available for this feature:
BLAST of CX295138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295138 ID=CX295138; Name=CX295138; organism=Citrus clementina; type=EST; length=641bpback to top |