CX295139

Overview
NameCX295139
Unique NameCX295139
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 5.310e-108
Identity = 191/225 (84.89%), Postives = 210/225 (93.33%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KL+FAQFS+LVNDFYNNGLPSNLS  RNPSLDYGFKG+EIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G SGELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPL QKLRQVLV+HAL NGE+EK +N+SIFQKIA FEEELKT+LPKEVE+AR   ENG+
Sbjct:  430 KLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTKEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTIGVSGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLAQKLRQVLVDHALVNGESEKNSNTSIFQKIATFEEELKTLLPKEVESARTAYENGN 654          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 6.934e-108
Identity = 192/224 (85.71%), Postives = 209/224 (93.30%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENG 674
            KLMFAQFS+LVNDFYNNGLPSNLSGGRNPSLDYGFKG+EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKT EA+DILKLMSST+LVALCQAIDLRHLEENL+ +VKNT+SQVAK+ LT G +GELHPSRFCE DLL+  DRE+VFAY+DDPCSATYPLMQKLRQVLVEHAL NGENEK A++SIFQKI AFE ELK VLPKEVE+AR  +E+G
Sbjct:  418 KLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGSEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTVEALDILKLMSSTYLVALCQAIDLRHLEENLRLSVKNTISQVAKRTLTTGVNGELHPSRFCELDLLRVVDREYVFAYVDDPCSATYPLMQKLRQVLVEHALKNGENEKNASTSIFQKIEAFEAELKAVLPKEVESARVALEDG 641          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.018e-107
Identity = 192/225 (85.33%), Postives = 210/225 (93.33%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVND+YNNGLPSNL+ GRNPSLDYGFKG+EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENL++ VKNTVSQVAK+ LT+GA+GELHPSRFCEKDLL+  DRE+VF Y DD CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE ELK VLPKEVE+AR ++ENG+
Sbjct:  417 KLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGSEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGANGELHPSRFCEKDLLRVVDREYVFRYADDACSANYPLMQKLRQVLVDHALENGENEKNANSSIFQKILAFEGELKAVLPKEVESARISLENGN 641          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 3.442e-107
Identity = 190/225 (84.44%), Postives = 213/225 (94.67%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVND+YNNGLPSNL+GGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAV+IL +MS+T+LVALCQAIDLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSRFCEKDLLK  DRE+VF YIDDPCSATYPLMQKLRQVLV+HAL NGE E+ +++SIFQKI AFEEELK +LPKEVE+AR  +ENG+
Sbjct:  276 KLMFAQFSELVNDYYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILNVMSTTWLVALCQAIDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRFCEKDLLKVVDREYVFTYIDDPCSATYPLMQKLRQVLVDHALMNGEKEQNSSTSIFQKIGAFEEELKILLPKEVESARLELENGN 500          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 4.495e-107
Identity = 191/225 (84.89%), Postives = 209/225 (92.89%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVNDFYNNGLPSNLS  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLIS+RKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G +GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPL QKLRQVLV+HAL NGE+EK  N+SIFQKIA FEEELKT+LPKEVE+AR   E+G+
Sbjct:  430 KLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKTNEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTMGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNFNTSIFQKIATFEEELKTLLPKEVESARTAYESGN 654          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 4.495e-107
Identity = 191/225 (84.89%), Postives = 209/225 (92.89%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVNDFYNNGLPSNL+G RNPSLDYGFKGAEIAMASYCSELQ+LANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAV+ILKLMSSTFLVALCQAIDLRH+EENLK  VKNTVSQVAK+VLTVG +GELHPSRFCEKDLL   +RE+VFAYIDDPCSATYPLMQKLR VLV+HAL NG+ E  +++SIFQKI AFE+ELKT+LPKEVE+ R  VENG+
Sbjct:  423 KLMFAQFSELVNDFYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHIEENLKSVVKNTVSQVAKRVLTVGVNGELHPSRFCEKDLLNVVEREYVFAYIDDPCSATYPLMQKLRHVLVDHALENGDREGNSSTSIFQKIGAFEQELKTLLPKEVESVRVDVENGN 647          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.001e-106
Identity = 188/225 (83.56%), Postives = 210/225 (93.33%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVND+YNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK+ VKNTVSQVAK+ LT+GA+GELHP+RFCEK+LL+  DRE++FAY DDPCS  YPLMQKLRQVLV+HA+NNGE+EK  NSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+
Sbjct:  420 KLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKNAVKNTVSQVAKRTLTMGANGELHPARFCEKELLRIVDREYLFAYADDPCSCNYPLMQKLRQVLVDHAMNNGESEKNVNSSIFQKIGAFEDELKAVLPKEVESARAALESGN 644          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.308e-106
Identity = 191/225 (84.89%), Postives = 206/225 (91.56%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVNDFYNNGLPSNLS GRNPSLDYGFKGAEIAMASYCSELQ LANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS+TFLV LCQA+DLRHLEENLK+ VKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAY DDPCS+TYPLMQKLR V+VEHALNNG  EK +N+SIFQKI++FE ELK  LPKEVE AR   ENGS
Sbjct:  409 KLMFAQFSELVNDFYNNGLPSNLSSGRNPSLDYGFKGAEIAMASYCSELQALANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVGLCQAVDLRHLEENLKNAVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVIDREYVFAYADDPCSSTYPLMQKLRAVIVEHALNNGVKEKDSNTSIFQKISSFENELKAALPKEVEAARAEFENGS 633          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 384.415 bits (986), Expect = 2.913e-106
Identity = 189/225 (84.00%), Postives = 208/225 (92.44%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMF QFS+LVND+YNNGLPSNL+ GRNPSLDYGFKG+EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSL LIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENL++ VKNTVSQVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DD CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+
Sbjct:  417 KLMFGQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGSEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLDLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGTNGELHPSRFCEKDLLRVVDREYVFAYADDACSANYPLMQKLRQVLVDHALQNGENEKNANSSIFQKILAFEDELKAVLPKEVESARAALESGN 641          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 2.913e-106
Identity = 186/225 (82.67%), Postives = 208/225 (92.44%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KL+FAQFS+LVND+YNNGLPSNL+ GRNPSLDYGFKG EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVD+LKLMSST+LVALCQAIDLRHLEENLK+ V+NTV+QVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DDPCSA YPL QKLRQVLV+HAL NGE+EK  ++SIFQKIAAFE+ELK VLPKEVE AR  +ENG+
Sbjct:  413 KLIFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGVEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDVLKLMSSTYLVALCQAIDLRHLEENLKNAVRNTVNQVAKRTLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCSANYPLFQKLRQVLVDHALQNGEHEKNVSTSIFQKIAAFEDELKAVLPKEVEGARSAIENGN 637          
The following BLAST results are available for this feature:
BLAST of CX295139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PALY_TRISU5.310e-10884.89Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PALY_DIGLA6.934e-10885.71Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL3_TOBAC2.018e-10785.33Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL4_POPKI3.442e-10784.44Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PALY_MEDSA4.495e-10784.89Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PAL2_CICAR4.495e-10784.89Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_TOBAC1.001e-10683.56Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PALY_BROFI1.308e-10684.89Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL2_TOBAC2.913e-10684.00Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_IPOBA2.913e-10682.67Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05069A04SK PhIFruit1 Citrus clementina cDNA clone C05069A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295139 ID=CX295139; Name=CX295139; organism=Citrus clementina; type=EST; length=677bp
GGAAGCTCATGTTTGCCCAATTTTCTGACCTTGTCAACGATTTTTACAAC
AATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCCTAGCCTGGATTA
TGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATTGTTCGGAGCTCC
AATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGTGCTGAACAGCAC
AACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAGGAAGACTGCTGA
AGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCTTGGTAGCGCTTT
GCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTGAAGCATACAGTC
AAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAACCGTCGGTGCTAG
TGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATCTGCTCAAAGCGG
CTGATCGCGAACACGTCTTTGCATACATTGATGACCCCTGCAGTGCTACC
TATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGAGCACGCACTGAA
CAATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCTTCCAGAAGATTG
CAGCCTTTGAGGAGGAATTGAAAACCGTTTTGCCGAAAGAAGTTGAGAAT
GCCAGGCAGACTGTTGAGAATGGAAGT
back to top