CX295139

Overview
NameCX295139
Unique NameCX295139
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 3.805e-106
Identity = 188/225 (83.56%), Postives = 208/225 (92.44%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KL+FAQFS+LVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS+TFLVALCQAIDLRHLEENLK  VKNTVSQV+K+VLT GA+GELHPSRFCEK+LLK  DRE+VFAY+DDPCSATYPLMQKLRQV V+HAL NGENEK  ++S+FQKI AFEEELK +LPKEVE+AR   ++G+
Sbjct:  420 KLLFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVALCQAIDLRHLEENLKSAVKNTVSQVSKRVLTTGANGELHPSRFCEKELLKVVDREYVFAYVDDPCSATYPLMQKLRQVFVDHALENGENEKNFSTSVFQKIEAFEEELKALLPKEVESARAAYDSGN 644          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_HELAN (Phenylalanine ammonia-lyase OS=Helianthus annuus GN=PAL PE=2 SV=2)

HSP 1 Score: 384.03 bits (985), Expect = 3.805e-106
Identity = 189/225 (84.00%), Postives = 206/225 (91.56%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            K+  AQFS+LVNDFYNNGLPS+LSGGRNPSLD GFKG EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQ+IDLRHLEEN+K TVKNTVSQVAKKVLT+G +GELHPSRFCEKDLL+  DRE+VFAY DDPC  TYPLMQKLRQVLV+HALNNGE EK AN+SIFQKIA FE+ELK +LPKEVE+ R   ENG+
Sbjct:  416 KVTIAQFSELVNDFYNNGLPSHLSGGRNPSLDSGFKGGEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQSIDLRHLEENMKSTVKNTVSQVAKKVLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCLTTYPLMQKLRQVLVDHALNNGETEKNANTSIFQKIATFEDELKAILPKEVESVRVAFENGT 640          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 6.490e-106
Identity = 190/224 (84.82%), Postives = 203/224 (90.62%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENG 674
            KLMFAQFS+LVNDFYNNGLPSNLS  RNPSLDYGFKG EIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLIS+RKT EAV+ILKLMS T+L+ALCQAIDLRHLEENLK+TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+ FAYIDDPCSATYPLMQKLRQVLVEHAL N ENEK  N+SIFQKI  FEEELKT+LPKEVE AR   ENG
Sbjct:  420 KLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNEAVEILKLMSPTYLIALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKIVDREYCFAYIDDPCSATYPLMQKLRQVLVEHALANAENEKNVNTSIFQKITTFEEELKTLLPKEVEGARIAYENG 643          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 6.490e-106
Identity = 187/225 (83.11%), Postives = 208/225 (92.44%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+GA GELHP+RFCEK+LL+  DRE++F Y DDPCS+TYPLMQKLRQVLV+HA+ NGE+EK  NSSIFQKI AFE+EL  VLPKEVE+AR  +E+G+
Sbjct:  425 KLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTIGAIGELHPARFCEKELLRVVDREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNINSSIFQKIGAFEDELNAVLPKEVESARALLESGN 649          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.207e-105
Identity = 186/225 (82.67%), Postives = 208/225 (92.44%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVND+YNNGLP NL+ GRNPSLDYG KGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK+ VKNTVSQVAKK L +GA+GELHP+RFCEK+LL+  +RE++F Y DDPCS+TYPLMQKLRQVLV+HA+ NGE+EK  NSSIFQKI AFE+ELK VLPKEVE+AR  VE+G+
Sbjct:  426 KLMFAQFSELVNDYYNNGLPLNLTAGRNPSLDYGLKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKNAVKNTVSQVAKKTLAMGANGELHPARFCEKELLQVVEREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNLNSSIFQKIVAFEDELKAVLPKEVESARAVVESGN 650          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.207e-105
Identity = 186/225 (82.67%), Postives = 207/225 (92.00%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KL+FAQFS+LVNDFYNNGLPSNLS  RNPSLDYGFKG+EIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKN VS VAK+ LT G +GELHPSRFCEKDLL+  DREHVF+YIDDPCSATYPLMQKLRQVLV+HAL NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+AR   ENG+
Sbjct:  429 KLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNMVSHVAKRTLTTGINGELHPSRFCEKDLLRVVDREHVFSYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESARGAYENGN 653          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.207e-105
Identity = 185/225 (82.22%), Postives = 207/225 (92.00%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KL+FAQFS+LVNDFYNNGLPSNLS  RNPSLDYGFKG+EIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++IL+LMSSTFL+ALCQA+DLRHLEENLK++VKN VSQVAK+ LT G +GELHPSRFCEKDLL+  DREHVFAYIDDPCSATYPLMQKLRQVLV+HAL NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+ R   E+G+
Sbjct:  428 KLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTYEAIEILQLMSSTFLIALCQAVDLRHLEENLKNSVKNIVSQVAKRTLTTGVNGELHPSRFCEKDLLRVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESTRAAYESGN 652          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 5.494e-105
Identity = 187/224 (83.48%), Postives = 205/224 (91.52%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENG 674
            KLMFAQFS+LVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++ILKLMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQV+K++LT G +GELHPSRFCEKDLLK  DRE++F+YIDDPCSATYPLMQKLRQVLV+HAL N E EK  NSSIFQKIA FEEELK +LPKEVE AR   E+G
Sbjct:  418 KLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYIFSYIDDPCSATYPLMQKLRQVLVDHALVNAECEKDVNSSIFQKIAIFEEELKNLLPKEVEGARAAYESG 641          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 379.793 bits (974), Expect = 7.176e-105
Identity = 187/225 (83.11%), Postives = 204/225 (90.67%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVNDFYNNGLPSNL+   NPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT+EAVDILKLMS+TFLV +CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE VF Y+DDPCSATYPLMQ+LRQV+V+HAL+NGE EK A +SIFQKI AFEEELK VLPKEVE AR    NG+
Sbjct:  422 KLMFAQFSELVNDFYNNGLPSNLTASSNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVGICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYPLMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEEELKAVLPKEVEAARAAYGNGT 646          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 379.407 bits (973), Expect = 9.372e-105
Identity = 187/225 (83.11%), Postives = 205/225 (91.11%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT+EAVDILKLMS+TFLVA+CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE V+ Y DDPCSATYPL+QKLRQV+V+HAL NGE+EK A +SIF KI AFEEELK VLPKEVE AR   +NG+
Sbjct:  430 KLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVAICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYPLIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGT 654          
The following BLAST results are available for this feature:
BLAST of CX295139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PALY_POPTR3.805e-10683.56Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PALY_HELAN3.805e-10684.00Phenylalanine ammonia-lyase OS=Helianthus annuus G... [more]
PALY_STYHU6.490e-10684.82Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PAL1_SOLTU6.490e-10683.11Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PAL5_SOLLC4.207e-10582.67Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL2_PEA4.207e-10582.67Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PEA4.207e-10582.22Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL1_SOYBN5.494e-10583.48Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL2_ARATH7.176e-10583.11Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PAL1_ARATH9.372e-10583.11Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05069A04SK PhIFruit1 Citrus clementina cDNA clone C05069A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295139 ID=CX295139; Name=CX295139; organism=Citrus clementina; type=EST; length=677bp
GGAAGCTCATGTTTGCCCAATTTTCTGACCTTGTCAACGATTTTTACAAC
AATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCCTAGCCTGGATTA
TGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATTGTTCGGAGCTCC
AATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGTGCTGAACAGCAC
AACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAGGAAGACTGCTGA
AGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCTTGGTAGCGCTTT
GCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTGAAGCATACAGTC
AAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAACCGTCGGTGCTAG
TGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATCTGCTCAAAGCGG
CTGATCGCGAACACGTCTTTGCATACATTGATGACCCCTGCAGTGCTACC
TATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGAGCACGCACTGAA
CAATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCTTCCAGAAGATTG
CAGCCTTTGAGGAGGAATTGAAAACCGTTTTGCCGAAAGAAGTTGAGAAT
GCCAGGCAGACTGTTGAGAATGGAAGT
back to top