CX295139

Overview
NameCX295139
Unique NameCX295139
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:1397..2073. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.599e-104
Identity = 188/223 (84.30%), Postives = 204/223 (91.48%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVEN 671
            KLMFAQFSDLVND+YNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT EA++ILKLMSSTFLVALCQAIDLRHLEENLK+TVKN VSQVAK+ LT G +GELHPSRFCEK LLK  +RE+ FAYIDDPCS TYPLMQKLRQVLV++AL NGENEK  N+SIFQKIA+FEEELKT+LPKEVE AR   EN
Sbjct:  417 KLMFAQFSDLVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEALEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKALLKVVEREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNLNTSIFQKIASFEEELKTLLPKEVEGARLAYEN 639          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.727e-104
Identity = 185/225 (82.22%), Postives = 206/225 (91.56%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KL+FAQFS+LVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVD+LKLMSST+LVALCQAIDLR LEENL++ VKN V+QVAK+ LTVGA+GELHP+RFCEKDLL+  DRE+VFAY DDPCSA YPLMQKLRQ LV+HAL NGENEK   +SIF K+AAFE+ELK VLPKEVE AR  VE+G+
Sbjct:  412 KLLFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDVLKLMSSTYLVALCQAIDLRFLEENLRNAVKNAVTQVAKRTLTVGANGELHPARFCEKDLLRVVDREYVFAYADDPCSANYPLMQKLRQALVDHALQNGENEKNTGTSIFLKVAAFEDELKAVLPKEVEAARIAVESGN 636          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.146e-102
Identity = 183/224 (81.70%), Postives = 203/224 (90.62%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENG 674
            KL+FAQFS+LVND+YNNGLPSNL+G RNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKT+EAV+ILKLMSS+FLVAL QA+DLRH+EEN++  VKNTVSQVAK+ LT G +GELHPSRF EKDLL+  DRE+VFAY DDPC  TYPLMQKLR+ LV HAL+NGENEK  N+SIF KIA FEEELK +LPKEVENAR +VENG
Sbjct:  415 KLLFAQFSELVNDYYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVEILKLMSSSFLVALFQAVDLRHIEENVRLAVKNTVSQVAKRTLTTGVNGELHPSRFSEKDLLRVVDREYVFAYADDPCLTTYPLMQKLRETLVGHALDNGENEKDVNTSIFHKIAIFEEELKAILPKEVENARASVENG 638          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 1.954e-102
Identity = 186/224 (83.04%), Postives = 202/224 (90.18%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENG 674
            KL+FAQFS+LVND+YNNGLPS L+G  NPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKT+EAVDILKLMSSTFLVALCQAIDLRHLEENLK  VK TVS VAK+ LTV  +GELHPSRF EKDLL   DRE++F+YIDDPC ATYPLMQKLR  LVEHAL NGE E++AN+SIF KIAAFEEELKT+LPKEV+NAR  +ENG
Sbjct:  415 KLIFAQFSELVNDYYNNGLPSILTGSSNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSSTFLVALCQAIDLRHLEENLKIVVKTTVSNVAKRTLTVSPNGELHPSRFSEKDLLTVVDREYLFSYIDDPCLATYPLMQKLRAELVEHALKNGERERSANTSIFHKIAAFEEELKTILPKEVDNARIEIENG 638          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 2.552e-102
Identity = 182/225 (80.89%), Postives = 205/225 (91.11%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTA+AVDILK+MSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+GA+GELHP+RF EK+LL+  DRE++FAY DDPCS+ YPLMQKLRQVLV+ A+ NGE+EK  NSSIFQKI AFE+EL  VLPKEVE+ R   E+G+
Sbjct:  409 KLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAKAVDILKIMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTMGANGELHPARFSEKELLRVVDREYLFAYADDPCSSNYPLMQKLRQVLVDQAMKNGESEKNVNSSIFQKIGAFEDELIAVLPKEVESVRAVFESGN 633          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 370.163 bits (949), Expect = 5.686e-102
Identity = 182/224 (81.25%), Postives = 202/224 (90.18%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENG 674
            KLMFAQFS+LVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSL LIS+RKT E+++ILKLMSSTFL+ LCQAIDLRHLEENLK +VKNTVSQV+K+ LT G +GELHPSRFCEKDLLK  DRE+VF+YIDDP S TYPLMQKLRQVLV+HAL N ENEK  N+SIFQKIA FEEELKT+LPKEVE+ R   E+G
Sbjct:  211 KLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLDLISARKTNESIEILKLMSSTFLMGLCQAIDLRHLEENLKSSVKNTVSQVSKRTLTTGGNGELHPSRFCEKDLLKVVDREYVFSYIDDPYSGTYPLMQKLRQVLVDHALINAENEKDVNTSIFQKIATFEEELKTILPKEVESTRAAYESG 434          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 3.685e-101
Identity = 183/225 (81.33%), Postives = 204/225 (90.67%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVND YNNGLPSNL+GGRNPSLDYGFKGAEIAMASYCSELQFL    TNHVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMS+TFLV LC ++DLRH+EENLK+TVK +VSQ+  +VLT+G +GELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPLMQKLRQVLVEHAL NGE  + + +SIFQKI +FEEELKT+LPKEVE+AR  VENG+
Sbjct:  416 KLMFAQFSELVNDLYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLDQSCTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSTTFLVGLCHSVDLRHIEENLKNTVKISVSQL-PRVLTMGFNGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLMQKLRQVLVEHALVNGEKVRNSTTSIFQKIGSFEEELKTLLPKEVESARLEVENGN 639          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 8.210e-101
Identity = 180/225 (80.00%), Postives = 202/225 (89.78%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KL+FAQFS+LVND+YNNGLPSNL+G R+PSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKT+EAV+ILKLMSS+FLVALCQA+DLRH+EEN++  VK TVSQVAKK L +G  G LHPSRF EK+LL+  DRE+VFAY DDPCSATYPLMQKLR+VLV HAL N  NEK A++SIF KI  FEEELK +LPKEVENAR +VENG+
Sbjct:  410 KLLFAQFSELVNDYYNNGLPSNLTGSRDPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVEILKLMSSSFLVALCQAVDLRHIEENVRLAVKKTVSQVAKKTLNIGVDGVLHPSRFSEKELLRVVDREYVFAYADDPCSATYPLMQKLREVLVSHALANSGNEKDASTSIFHKIGVFEEELKGILPKEVENARASVENGT 634          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 5.322e-100
Identity = 180/225 (80.00%), Postives = 200/225 (88.89%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS+T+LVALCQA+DLRHLEENLK  VK+ VSQVAK+VLTVGA+GELHPSRF E+D+L+  DRE+VF+Y DDPCS TYPLMQKLR +LV+HAL + E E  + +S+F KI AFE ELK +LPKEVE  R   E G+
Sbjct:  412 KLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTYLVALCQAVDLRHLEENLKKAVKSAVSQVAKRVLTVGANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYPLMQKLRHILVDHALADPEREANSATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGT 636          
BLAST of CX295139 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.236e-98
Identity = 179/225 (79.56%), Postives = 195/225 (86.67%), Query Frame = 3
Query:    3 KLMFAQFSDLVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGS 677
            KLMFAQFS+LVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFL NPVTNHVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMSSTFLVALCQAIDLRHLEEN+K+ VK+ V  VA+K L+   +G LH +RFCEKDLL   DRE VFAY DDPCSA YPLMQK+R VLVEHAL NGE E    +S+F K+A FE+EL+ VLPKEVE AR  VENG+
Sbjct:  405 KLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKTVARKTLSTDNNGHLHNARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALANGEAEAHVETSVFAKLAMFEQELRAVLPKEVEAARSAVENGT 629          
The following BLAST results are available for this feature:
BLAST of CX295139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PAL2_PHAVU1.599e-10484.30Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_IPOBA2.727e-10482.22Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL1_LITER1.146e-10281.70Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PAL1_RUBID1.954e-10283.04Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PAL1_SOLLC2.552e-10280.89Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL1_PHAVU5.686e-10281.25Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PAL2_POPKI3.685e-10181.33Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL2_LITER8.210e-10180.00Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL4_ARATH5.322e-10080.00Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]
PALY_WHEAT2.236e-9879.56Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]

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Properties
Property NameValue
Genbank descriptionC05069A04SK PhIFruit1 Citrus clementina cDNA clone C05069A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295139 ID=CX295139; Name=CX295139; organism=Citrus clementina; type=EST; length=677bp
GGAAGCTCATGTTTGCCCAATTTTCTGACCTTGTCAACGATTTTTACAAC
AATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCCTAGCCTGGATTA
TGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATTGTTCGGAGCTCC
AATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGTGCTGAACAGCAC
AACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAGGAAGACTGCTGA
AGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCTTGGTAGCGCTTT
GCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTGAAGCATACAGTC
AAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAACCGTCGGTGCTAG
TGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATCTGCTCAAAGCGG
CTGATCGCGAACACGTCTTTGCATACATTGATGACCCCTGCAGTGCTACC
TATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGAGCACGCACTGAA
CAATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCTTCCAGAAGATTG
CAGCCTTTGAGGAGGAATTGAAAACCGTTTTGCCGAAAGAAGTTGAGAAT
GCCAGGCAGACTGTTGAGAATGGAAGT
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