CX295156

Overview
NameCX295156
Unique NameCX295156
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.088e-54
Identity = 99/156 (63.46%), Postives = 131/156 (83.97%), Query Frame = 1
Query:  199 KLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            K+I++R ++Y KEY E ++E IRL+REAKL G FYV  E KL+F+IRI+GI+ + PK +K+LQLLRL QI NGVF+++ KAT  +L  VEPY+ +GYPNL SV++L+YKRGYGK+NKQRI L+DN+IIE+ALG++GIICMEDLIHEI TVGP F++
Sbjct:   48 KVIFSRAEKYVKEYREAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIPLSDNAIIEEALGKYGIICMEDLIHEIYTVGPAFKQ 203          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7_CHICK (60S ribosomal protein L7 OS=Gallus gallus GN=RPL7 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.074e-54
Identity = 101/156 (64.74%), Postives = 125/156 (80.13%), Query Frame = 1
Query:  196 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFR 663
            RK+IY R K Y KEY    ++ IR+ R A+  G +YV  E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML  VEPY+ +GYPNLKSV +LIYKRGYGK+NK+RIALTDNS+I + LG+ GIICMED+IHEI TVG +F+
Sbjct:   45 RKIIYERAKAYHKEYRHMYRQEIRMARMARKAGNYYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGYGKINKKRIALTDNSLIRKRLGKLGIICMEDVIHEIYTVGKNFK 200          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7C_SCHPO (60S ribosomal protein L7-C OS=Schizosaccharomyces pombe GN=rpl7c PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.829e-50
Identity = 102/185 (55.14%), Postives = 131/185 (70.81%), Query Frame = 1
Query:  112 LKKKKRXXXXXXXXXXXXXXXXXXXXXTRKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            LKKKK                       R+LI  R + Y  EY + ++E I L R+A+ +G +YV  E KL+F+IRIRGIN + PK +KI+QLLRL QI NGVF+K NKAT  ML  VEPYVTYG PNLK+V+EL+YKRG+GK+NKQRIAL+DN+IIE ALG++ I+ +EDLIHEI TVGP+F++
Sbjct:   21 LKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQ 205          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7_ASHGO (60S ribosomal protein L7 OS=Ashbya gossypii GN=RPL7 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.548e-49
Identity = 90/157 (57.32%), Postives = 123/157 (78.34%), Query Frame = 1
Query:  196 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            R  I  R   Y KEY+  ++ +I+ KREAK  G +YV  + KL+F+IRI+GIN + PK +K+LQLLRL QI +GVF+KV KAT  +L  VEPYV YGYP+  ++++L+YKRGYGK+NKQRIAL++NSI+E  LG++GII ++DLIHEI+TVGPHF++
Sbjct:   40 RAAILERNAAYHKEYETAERAVIQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAYGYPSYSTIRQLVYKRGYGKINKQRIALSENSIVEANLGKYGIISVDDLIHEIITVGPHFKQ 196          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7_CAEEL (60S ribosomal protein L7 OS=Caenorhabditis elegans GN=rpl-7 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.641e-49
Identity = 90/155 (58.06%), Postives = 121/155 (78.06%), Query Frame = 1
Query:  208 YNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRRQT 672
            + R ++Y +EY   QKE +RLKREA+ KG FYV  E K+ F++RIRGIN + PK +K LQ+LRLRQI NGVF+K+NKATL +L  +EPYV +GYPN K++ +L+YKRGY K++  R+ +TDN+I+EQ+LG+  IIC+EDL HEI TVGPHF+  T
Sbjct:   47 FKRAEKYVQEYRNAQKEGLRLKREAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLLRIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVPITDNTIVEQSLGKFNIICLEDLAHEIATVGPHFKEAT 201          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7_DICDI (60S ribosomal protein L7 OS=Dictyostelium discoideum GN=rpl7 PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.311e-48
Identity = 91/153 (59.48%), Postives = 120/153 (78.43%), Query Frame = 1
Query:  208 YNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            + R ++Y  EY + ++E IRL R AK  G FYV P AK+ F+IRIRGIN V PK +K+L+LLRL Q+ NGVF+K+NKA++NML  VEPYV YG+PNLKS+KELIYKRG+ K++ QRI LT N ++E+ LG+ GIIC+ED+IHEI T G HF++
Sbjct:   49 FKRAEKYVSEYHKTEREAIRLNRIAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINMLKLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIPLTSNDMVEKQLGKFGIICVEDIIHEITTCGKHFKQ 201          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7_DEBHA (60S ribosomal protein L7 OS=Debaryomyces hansenii GN=RPL7 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.712e-48
Identity = 86/157 (54.78%), Postives = 125/157 (79.62%), Query Frame = 1
Query:  196 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            RK+I++R   Y KEY + ++ +I+ KR+AK  G +YV+ + KL+F++RI+GIN + PK +K+LQLLRL QI  GVF+++ KAT  +L   EPY+ YGYPNL +++ L+YKRG+GK+NKQRIAL+DN+IIE  LG++GI+ +EDLIHEI TVGP+F++
Sbjct:   39 RKIIFDRAAAYQKEYTDAERAVIKAKRDAKAAGSYYVDAQPKLVFVVRIKGINKIAPKPRKVLQLLRLTQINAGVFVRLTKATSELLKLAEPYIAYGYPNLSTIRHLVYKRGHGKINKQRIALSDNAIIEANLGKYGILSIEDLIHEIYTVGPNFKQ 195          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7B_YEAST (60S ribosomal protein L7-B OS=Saccharomyces cerevisiae GN=RPL7B PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 8.496e-48
Identity = 83/157 (52.87%), Postives = 123/157 (78.34%), Query Frame = 1
Query:  196 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            R +I  R   Y KEY+  ++ +I+ KR+AK  G +YV  + KL+F++RI+GIN + PK +K+LQLLRL +I +G F+KV KATL +L  +EPYV YGYP+  ++++L+YKRG+GK+NKQR+ L+DN+IIE  LG++GI+ ++DLIHEI+TVGPHF++
Sbjct:   41 RAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQ 197          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7A_YEAST (60S ribosomal protein L7-A OS=Saccharomyces cerevisiae GN=RPL7A PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 8.496e-48
Identity = 83/157 (52.87%), Postives = 123/157 (78.34%), Query Frame = 1
Query:  196 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            R +I  R   Y KEY+  ++ +I+ KR+AK  G +YV  + KL+F++RI+GIN + PK +K+LQLLRL +I +G F+KV KATL +L  +EPYV YGYP+  ++++L+YKRG+GK+NKQR+ L+DN+IIE  LG++GI+ ++DLIHEI+TVGPHF++
Sbjct:   41 RAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLIHEIITVGPHFKQ 197          
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7B_SCHPO (60S ribosomal protein L7-B OS=Schizosaccharomyces pombe GN=rpl7b PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.110e-47
Identity = 92/157 (58.60%), Postives = 122/157 (77.71%), Query Frame = 1
Query:  196 RKLIYNRTKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666
            R+LI  R + Y  EY   ++E I L R+A+ +G ++V  E KL+F++RIRGIN + PK +KI+QLLRL QI NG+F+K NKA   ML  VEPYVTYG PN K+V+ELIYKRG+GK+NKQRI L+DN+IIE ALG++ I+ +EDLIHEI TVGP+F++
Sbjct:   48 RELIAKRAEAYEAEYRAAEREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQ 204          
The following BLAST results are available for this feature:
BLAST of CX295156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL7_YARLI2.088e-5463.4660S ribosomal protein L7 OS=Yarrowia lipolytica GN... [more]
RL7_CHICK6.074e-5464.7460S ribosomal protein L7 OS=Gallus gallus GN=RPL7 ... [more]
RL7C_SCHPO1.829e-5055.1460S ribosomal protein L7-C OS=Schizosaccharomyces ... [more]
RL7_ASHGO1.548e-4957.3260S ribosomal protein L7 OS=Ashbya gossypii GN=RPL... [more]
RL7_CAEEL2.641e-4958.0660S ribosomal protein L7 OS=Caenorhabditis elegans... [more]
RL7_DICDI1.311e-4859.4860S ribosomal protein L7 OS=Dictyostelium discoide... [more]
RL7_DEBHA1.712e-4854.7860S ribosomal protein L7 OS=Debaryomyces hansenii ... [more]
RL7B_YEAST8.496e-4852.8760S ribosomal protein L7-B OS=Saccharomyces cerevi... [more]
RL7A_YEAST8.496e-4852.8760S ribosomal protein L7-A OS=Saccharomyces cerevi... [more]
RL7B_SCHPO1.110e-4758.6060S ribosomal protein L7-B OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC05069B09SK PhIFruit1 Citrus clementina cDNA clone C05069B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295156 ID=CX295156; Name=CX295156; organism=Citrus clementina; type=EST; length=694bp
GGCGCGAAGCCAGAACGCCTCCGTGAAGAAGATAGATCTAAAAGACCTCT
AAGAACAAATTGAACCAAAGAGATGGCTGAAGCAGCAGCTGTTGTGGTAC
CAGAGTCAGTGTTGAAGAAGAAGAAGAGAGAGGAGGAATGGGCATTGGCC
AAGAAGCAGGAGCTGGAAGCCGCGAAGAAGAAGAAGGCTGAGACCCGGAA
GCTCATTTACAACAGAACCAAACAGTACGCTAAAGAGTACGATGAAGAGC
AAAAAGAACTCATTCGTTTGAAGCGTGAGGCCAAGCTTAAGGGTGGATTT
TATGTCAACCCAGAAGCTAAGCTTTTGTTCATTATCAGGATTCGCGGTAT
CAATGCTGTTGATCCAAAGACCAAGAAAATTTTGCAGCTTCTCCGTTTGA
GACAGATTTTTAATGGTGTCTTTTTGAAAGTGAACAAAGCCACACTCAAT
ATGCTGCACAGAGTTGAGCCCTATGTAACATATGGGTACCCCAATTTAAA
GAGTGTCAAAGAACTGATTTACAAGAGGGGTTACGGCAAATTAAATAAGC
AGAGGATTGCTTTGACCGACAATTCTATCATCGAACAGGCTCTTGGGCAG
CATGGAATTATCTGCATGGAAGATCTCATCCATGAGATTTTGACTGTTGG
TCCTCACTTCAGGAGGCAAACACTTCCTATGGCCCTTCAGCTCA
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