CX295156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.366e-21 Identity = 62/155 (40.00%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 232 KEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVD--PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNK------QRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRRQT 672 ++ DEE +E L RE + G E LLF+IR++G AV K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S++ LI KR + + I L DN+I+E+ LG G+IC+ED+IHEI T+G +F + T Sbjct: 112 QDVDEEDEEDDGLIREKIVYDG-----EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCT 261
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 322 LLFIIRIRGINAVDPKTK--KILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHF 660 LLFI+R+RG AV+ K KIL LLRL + GVF+K+ K +L + PYV G P+L S++ LI KRG + I L DN+I+E+ LG HGIIC+ED+IHEI T+G F Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESF 261
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20 Identity = 51/128 (39.84%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 307 NPEAKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG---YGKLNKQ---RIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666 N E +LLF++R++G A + K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS++ LI KR Y + +++ I L DN+I+E+ LG G+IC++D+IHEI T+G +F + Sbjct: 131 NGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTK 258
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 316 AKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666 A LLF++R+RG A + K ++L LLRL ++ GVF+++ +L V PYV G P+L S++ L+ KR G+ + L DN ++E+ LG G+IC+ED+IHEI T+G F + Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAK 234
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 53/127 (41.73%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 316 AKLLFIIRI----RGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY-----GKLNKQRIA-LTDNSIIEQALGQH-GIICMEDLIHEILTVGPHFR 663 AKLLFIIRI +G+ V K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+++L KR + + RI L +N ++E G G IC+EDLIHE+ T+G HF+ Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFK 217
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 47/150 (31.33%), Postives = 90/150 (60.00%), Query Frame = 1 Query: 217 TKQYAKEYDEEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRR 666 T++ +Y E+++E+ L++++ +K GFYV EA+ +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +++L+Y +G G+ R+ LT+ I + G+ I C+E+L+H I F++ Sbjct: 48 TEKLLNKYYEQEREI--LEKKSSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKK 193
BLAST of CX295156 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 45/125 (36.00%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 322 LLFIIRIRG-INAVDP-KTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKL------NKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFRRQT 672 L I+R G + A P K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++V++L+ KR + +++ L DN+++E+ LG GIIC+ED+IHE + F+ T Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVT 156 The following BLAST results are available for this feature:
BLAST of CX295156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295156 ID=CX295156; Name=CX295156; organism=Citrus clementina; type=EST; length=694bpback to top |