CX295180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TPSD1_PICAB (Levopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-LAS PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.251e-23 Identity = 61/155 (39.35%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 249 VKHALELPLHWRMRRLEARWFIDVYESGPD--------------MNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDLPNNM 671 V++AL+ P H M RLEAR +I+ Y GP+ N LELAK+D+N VQ++H ++L+ + RWW +G E L F R+RV E +F +FEP+F CR + + ++DD+YD +GTLD+L+LF+D+V+ L L + M Sbjct: 490 VEYALKYPWHRSMPRLEARSYIEHY--GPNDVWLGKTMYMMPYISNEKYLELAKLDFNHVQSLHQKELRDLRRWWTSSGFTE-LKFTRERVTEIYFSPASFMFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDDLKLFSDSVKKWDLSLVDRM 641
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TASY_TAXCH (Taxadiene synthase OS=Taxus chinensis GN=TDC1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23 Identity = 69/188 (36.70%), Postives = 107/188 (56.91%), Query Frame = 3 Query: 159 DAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESG-----------PDM-NPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNNMQ 674 DA +F YL++ +A I N L +++ +E P H + R EAR +ID Y+ P + N LELAK+D+NIVQ++H E+LK ++RWWK++G+ + +NF R RV E +F + FEP++ R + CL L DD+ D++ TLDEL+ FT+ V+ S + ++P MQ Sbjct: 467 DARKFAEPYLRDALATK-ISTNTK--LFKEIEYVVEYPWHMSIPRSEARSYIDSYDDDYVWERKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMAD-INFTRHRVAEVYFSSA--TFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVKRWDTSLLHEIPECMQ 648
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TPSD1_PINTA (Levopimaradiene synthase, chloroplastic OS=Pinus taeda GN=LPS PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22 Identity = 59/155 (38.06%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 249 VKHALELPLHWRMRRLEARWFIDVYESGPD--------------MNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDLPNNM 671 V++AL+ P H M RLEAR +I+ Y GP+ N LELAK+D+N VQ H ++L+ + RWW +G + L F R+RV E +F +FEP+F CR + + ++DD+YD +GTLD L+LF+++V+ L L + M Sbjct: 481 VEYALKYPWHRSMPRLEARSYIENY--GPNDVWLGKTMYMMPNISNEKYLELAKLDFNRVQFFHRQELQDIRRWWNSSGFSQ-LGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQM 632
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TPSD2_ABIGR (Myrcene synthase, chloroplastic OS=Abies grandis GN=ag2 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21 Identity = 66/185 (35.68%), Postives = 101/185 (54.59%), Query Frame = 3 Query: 150 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYES------GPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE----SHVLDLPNNMQ 674 + +A F+T YLKE + K + E +K +E H + RLEAR +ID E + LLELAK+++NI ++ ++L+Y+ RWWK++ L KL FAR R VE + +P+ R A + L+T++DD+YD +GT+DELELFT A++ S + LP M+ Sbjct: 235 VMEEAEIFSTRYLKEALQKIPVSALSQE-----IKFVMEYGWHTNLPRLEARNYIDTLEKDTSAWLNKNAGKKLLELAKLEFNIFNSLQQKELQYLLRWWKESDL-PKLTFARHRHVEFYTLASCIAIDPKHSAFRLGFAKMCHLVTVLDDIYDTFGTIDELELFTSAIKRWNSSEIEHLPEYMK 413
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20 Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 150 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVY---ESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 641 + +A F+T YL+E + K L ++ LE H + RLEAR ++DV+ + LLELAK+++NI ++ +LK+VSRWWK +G E + F R R VE + FEPQ R ++ L+T++DD+YDV+GT+DELELFT ++ Sbjct: 228 VMDEAETFSTKYLREALQKIPASS----ILSLEIRDVLEYGWHTNLPRLEARNYMDVFGQHTKNKNAAEKLLELAKLEFNIFHSLQERELKHVSRWWKDSGSPE-MTFCRHRHVEYYALASCIAFEPQHSGFRLGFTKMSHLITVLDDMYDVFGTVDELELFTATIK 389
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: BARS_ARATH (Alpha-barbatene synthase OS=Arabidopsis thaliana GN=BS PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 67/216 (31.02%), Postives = 107/216 (49.54%), Query Frame = 3 Query: 33 FSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKL--NFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVESHVLDLPNNMQ 674 F F + G FK S ++ KGM I +A+ FT +L+ + ++ L+++AL +P H ++ L AR +I YE D + LL+LAK+++ +Q + ++LK ++ WW K L NF R+R VE +F + FEPQF R MSA + ++T +DD D YG++ E+E D +E D N+Q Sbjct: 132 FKIFKGDDGKFK-ESLIEDVKGMLSFYEAVHFGTTT-DHILDEALSFTLNHLESLATGR---RASPPHISKLIQNALHIPQHRNIQALVAREYISFYEHEEDHDETLLKLAKLNFKFLQLHYFQELKTITMWWTKLDHTSNLPPNF-RERTVETWFAALMMYFEPQFSLGRIMSAKLYLVITFLDDACDTYGSISEVESLADCLERWDPDYMENLQ 341
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20 Identity = 63/171 (36.84%), Postives = 94/171 (54.97%), Query Frame = 3 Query: 150 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVY-----ESGPDMNPI----LLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDA 635 + +A F+ +YLKE + K + E +++ LE H + RLEAR +IDVY ES +M + LL+LAK+++NI ++ ++L+Y+SRWWK + L F R R VE + EP+ R LLT++DD+YD +GTLDEL+LFT A Sbjct: 242 VMEEAEIFSASYLKEVLQKIPVSSFSRE-----IEYVLEYGWHTNLPRLEARNYIDVYGQDSYESSNEMPYVNTQKLLKLAKLEFNIFHSLQQKELQYISRWWKDS-CSSHLTFTRHRHVEYYTMASCISMEPKHSAFRLGFVKTCHLLTVLDDMYDTFGTLDELQLFTTA 406
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TPSDA_ABIGR (Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20 Identity = 60/173 (34.68%), Postives = 97/173 (56.07%), Query Frame = 3 Query: 150 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESG--------PDMN-PILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 641 + +A F+ +YLK+ + K + E +++ LE H + RLEAR +I+VYE P MN LL+LAK+++NI ++ +L+ +SRWWK++G +L F R R VE + P+ R V L+T++DD+YD +GT++EL+LFTDA++ Sbjct: 242 VMEEAEIFSASYLKKVLQKIPVSNLSGE-----IEYVLEYGWHTNLPRLEARNYIEVYEQSGYESLNEMPYMNMKKLLQLAKLEFNIFHSLQLRELQSISRWWKESG-SSQLTFTRHRHVEYYTMASCISMLPKHSAFRMEFVKVCHLVTVLDDIYDTFGTMNELQLFTDAIK 408
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19 Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = 3 Query: 150 IFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPIL-------------LELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAV 638 + +A F++ YLKE V K + E + + LE H M RLE R ++DV+ G +P L LELAK+++NI ++ ++L+Y+SRWW +GL E L F R R VE + + EP+ R A L+T++DD+YD +GT+DE+ELF +AV Sbjct: 233 VMEEAEIFSSRYLKEAVQKIPVSSLSQE-----IDYTLEYGWHTNMPRLETRNYLDVF--GHPTSPWLKKKRTQYLDSEKLLELAKLEFNIFHSLQQKELQYLSRWWIHSGLPE-LTFGRHRHVEYYTLSSCIATEPKHSAFRLGFAKTCHLITVLDDIYDTFGTMDEIELFNEAV 400
BLAST of CX295180 vs. ExPASy Swiss-Prot
Match: GBIS2_ARATH ((Z)-gamma-bisabolene synthase 2 OS=Arabidopsis thaliana GN=TPS13 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 63/204 (30.88%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 33 FSRFMDEKGSFKLSSHSDECKGMXXXXXXXXXXXXXXSSIFRDAIRFTTAYLKEWVAKHDIDKNDDEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAIH*EDLKYVSRWWKKTGLGEKL-NFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTLIDDVYDVYGTLDELELFTDAVE 641 F RF + G F+ S +++ KG+ I +A+ FT+++LK + + ++ L+++ L LP W M + AR +I YE D + +LL LAK+++ ++Q + ++LK +WW + GL K + R+R+VE + + FEPQF R ++A N LLT++DD D Y ++ EL D VE Sbjct: 129 FKRFTGDDGKFERSL-TEDAKGILSLYEAAHLGTTT-DYILDEALEFTSSHLKSLL----VGGMCRPHILRLIRNTLYLPQRWNMEAVIAREYISFYEQEEDHDKMLLRLAKLNFKLLQLHYIKELKTFIKWWMELGLTSKWPSQFRERIVEAWLAGLMMYFEPQFSGGRVIAAKFNYLLTILDDACDHYFSIPELTRLVDCVE 326 The following BLAST results are available for this feature:
BLAST of CX295180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295180 ID=CX295180; Name=CX295180; organism=Citrus clementina; type=EST; length=695bpback to top |