CX295184

Overview
NameCX295184
Unique NameCX295184
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length545
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.950e-28
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFWVGPF+GA +AA YHQ V+RA
Sbjct:  206 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRA 272          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIP+TGTGINPARSLGAA++YNKD+ WDDHWIFWVGP +GA +AA YHQ ++RA
Sbjct:  213 LPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRA 279          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA
Sbjct:  210 LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA
Sbjct:  211 LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27
Identity = 56/71 (78.87%), Postives = 60/71 (84.51%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVF+VHLATIPITGTGINPARS GAA+IYNK R WDDHWIFWVGPFVGA  AA YHQ V+RA   K
Sbjct:  201 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIK 271          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216
            +P GFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDDHWIFWVGPFVGA  AA YHQ ++RA   K
Sbjct:  197 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIK 267          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIPITGTGINPARSLGAA++YN  + W D WIFWVGPF+GA +AALYHQ+V+RA
Sbjct:  210 LPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIPITGTGINPARS GAA+I+NK + WDDHWIFWVGPF+GA +AA YHQ V+RA
Sbjct:  204 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRA 270          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.857e-27
Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIP+TGTGINPARSLGAA++YN  + W D WIFWVGPF+GA +AALYHQ+V+RA
Sbjct:  205 LPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 271          
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.857e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 1
Query:    4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204
            +P GFAVF+VHLATIPITGTGINPARSLG A+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA
Sbjct:  210 LPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276          
The following BLAST results are available for this feature:
BLAST of CX295184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
PIP21_ARATH5.950e-2879.10Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP22_MAIZE7.771e-2876.12Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP24_MAIZE1.325e-2779.10Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE1.325e-2779.10Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP1_ATRCA1.325e-2778.87Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP28_ARATH2.953e-2774.65Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP26_MAIZE2.953e-2776.12Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP23_ARATH2.953e-2777.61Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP25_ORYSJ3.857e-2774.63Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP22_ORYSJ3.857e-2777.61Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC05069E01SK PhIFruit1 Citrus clementina cDNA clone C05069E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295184 ID=CX295184; Name=CX295184; organism=Citrus clementina; type=EST; length=545bp
GAGGTGCCAACTGGGTTCGCTGTGTTTTTGGTTCACTTGGCTACCATCCC
AATTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCA
TCTACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGA
CCATTCGTTGGAGCTGGACTTGCAGCTTTGTACCACCAAGTCGTGATCAG
AGCCATTCCCTTCAAATGAAGCTGATCGCTTCATCGACGTTCGTGATTGC
ACCTGCATTTGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAA
TATTAATTAGTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGACCTGCT
TCTGTGTTTTCCTTCCTTAAAACGTTTTTTTTTTTTTTTTTTTGAAGAGA
GGTCGATGATGATGACGGATGGGCCCATGGCTAAGTAGGTGGGCGCTGTC
ACTTTGTACATTTGTATGGCTGTGGATTTGTGCAATGTCATCTTGGTAAT
AATATGGACAAAACTAGTTCTATTACTTTTATTAAAAAAAAAAAA
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