CX295184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.950e-28 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIPITGTGINPARS GAA+IYNK + WDDHWIFWVGPF+GA +AA YHQ V+RA Sbjct: 206 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRA 272
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.771e-28 Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIP+TGTGINPARSLGAA++YNKD+ WDDHWIFWVGP +GA +AA YHQ ++RA Sbjct: 213 LPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRA 279
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA Sbjct: 210 LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIPITGTGINPARSLGAA+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA Sbjct: 211 LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 277
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.325e-27 Identity = 56/71 (78.87%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216 +P GFAVF+VHLATIPITGTGINPARS GAA+IYNK R WDDHWIFWVGPFVGA AA YHQ V+RA K Sbjct: 201 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIK 271
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27 Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 216 +P GFAVF+VHLATIPITGTGINPARS GAA+IYN ++ WDDHWIFWVGPFVGA AA YHQ ++RA K Sbjct: 197 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIK 267
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27 Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIPITGTGINPARSLGAA++YN + W D WIFWVGPF+GA +AALYHQ+V+RA Sbjct: 210 LPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27 Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIPITGTGINPARS GAA+I+NK + WDDHWIFWVGPF+GA +AA YHQ V+RA Sbjct: 204 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRA 270
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.857e-27 Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIP+TGTGINPARSLGAA++YN + W D WIFWVGPF+GA +AALYHQ+V+RA Sbjct: 205 LPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 271
BLAST of CX295184 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.857e-27 Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 1 Query: 4 VPTGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRA 204 +P GFAVF+VHLATIPITGTGINPARSLG A+IYNKD+ WDD WIFWVGP +GA +AA YHQ V+RA Sbjct: 210 LPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276 The following BLAST results are available for this feature:
BLAST of CX295184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295184 ID=CX295184; Name=CX295184; organism=Citrus clementina; type=EST; length=545bpback to top |