CX295195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.249e-23 Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = 3 Query: 66 CGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 C + ++ +G G +G +I++ +F +LP R++ +C ARGFYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG ++ WGYC+ +++ + RGPIQLT + NY Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATS-----------PPYYGRGPIQLTGQSNY 142
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.018e-22 Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 141 SREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD--XXXXXXXXXXXXXXXXRGPIQLTWKCNYLRC 500 + MFE +LP RN++ C +GFYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC + +++ SD RGP+QL W NY C Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGEC 189
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.605e-21 Identity = 58/157 (36.94%), Postives = 77/157 (49.04%), Query Frame = 3 Query: 45 QGGSAQNCGSGAVCGERD------TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD--XXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 +GG C G+ D T G + +++ + FE +LP+R+D C ARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYCY SD RGP+Q+ + NY Sbjct: 64 KGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY 213
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.605e-21 Identity = 58/157 (36.94%), Postives = 77/157 (49.04%), Query Frame = 3 Query: 45 QGGSAQNCGSGAVCGERD------TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSD--XXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 +GG C G+ D T G + +++ + FE +LP+R+D C ARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYCY SD RGP+Q+ + NY Sbjct: 64 KGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY 213
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.912e-20 Identity = 53/122 (43.44%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 126 LGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT HETTGGWP AP G Y G RGPIQ+++ NY Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------------------STSDYFGRGPIQISYNYNY 93
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.136e-15 Identity = 51/152 (33.55%), Postives = 72/152 (47.37%), Query Frame = 3 Query: 48 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS----DXXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 G + CG+G G D T+ + I++ E F L+ + D+ C A+GFYT DAF+ AA +P+FG +G+ KREIAAFFA HET +CYI ++ S D RGP+Q++W NY Sbjct: 43 GTGSDYCGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVA-QADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY 179
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 6.214e-15 Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 3 Query: 48 GGSAQNCGSGAVCGERD--TGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR--QVSHGSDXXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 G Q S +V G R +G+ T +++ +F+ + +R D C ++GFY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C+I V+ RGPIQLT NY Sbjct: 102 GSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY 250
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.886e-12 Identity = 43/156 (27.56%), Postives = 66/156 (42.31%), Query Frame = 3 Query: 48 GGSAQNCGSGAVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS---DXXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 G + + CG G G +G G G + +++ F + + C + FYT AF+ A K +P F + G++ KREIAAFFA HET +CYI +++ + D RGP+Q++W NY Sbjct: 38 GTTDEYCGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY 179
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.923e-12 Identity = 50/159 (31.45%), Postives = 68/159 (42.77%), Query Frame = 3 Query: 48 GGSAQNCGSGAVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS----DXXXXXXXXXXXXXXXXRGPIQLTWKCNYLRC 500 G + CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +CYI +++ S D RGPIQL+W NY C Sbjct: 42 GSTDAYCGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC 182
BLAST of CX295195 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.430e-12 Identity = 42/144 (29.17%), Postives = 61/144 (42.36%), Query Frame = 3 Query: 69 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGS---DXXXXXXXXXXXXXXXXRGPIQLTWKCNY 491 G G G G G+ G + +++ F + + C + FYT AF+ A A+P F + G E KREIAAFFA HET +CYI +++ + D RGP+Q++W NY Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGI-KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY 190 The following BLAST results are available for this feature:
BLAST of CX295195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295195 ID=CX295195; Name=CX295195; organism=Citrus clementina; type=EST; length=500bpback to top |