CX295252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_ECO57 (Signal recognition particle protein OS=Escherichia coli O157:H7 GN=ffh PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.437e-33 Identity = 78/160 (48.75%), Postives = 102/160 (63.75%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 MF LT L + G LT++N+ + +R++R ALLEADV+LPVVR F+ V E+AVG + + + P Q+ VKIVR+ELV MG E L A P V+L+AGLQG GKTT KL +L+ K K ++V+ DVYRPAAI QL L EQVGV + Sbjct: 1 MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_BUCAP (Signal recognition particle protein OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ffh PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31 Identity = 70/162 (43.21%), Postives = 109/162 (67.28%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIA 665 MF LT L + K+ + LT+ENI + +R++R+ALLEADV+L V+++F+Q VS++A+G + + + P Q+ +KIV++EL+ MG + +L + P +IL+ GLQGVGKTT KLA ++K K K + V+ D+YR AAI QL IL +QV + Y++ Sbjct: 1 MFNNLTERLSQSLRKIINKGRLTEENIKDTIREVRKALLEADVTLSVIKKFIQNVSKKAIGHEINKSLTPGQEFIKIVKNELILSMGEKNHDLNLSIQPPAIILVVGLQGVGKTTTLVKLAKWIKEKYKKKILTVSTDIYRAAAIKQLQILSDQVKIDFYLS 162
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_HAEIN (Signal recognition particle protein OS=Haemophilus influenzae GN=ffh PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.487e-30 Identity = 74/160 (46.25%), Postives = 100/160 (62.50%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 MF L+ L + G+ LT++NI E +R++R ALLEADV+LPVVR F+ V E A+G + + + P Q+ +KIV+ EL K MG L A P VIL+AGLQG GKTT KLA +L+ + K ++V+ DVYRPAAI QL L + VGV + Sbjct: 1 MFENLSDRLSKTLRNITGKGRLTEDNIKETLREVRMALLEADVALPVVREFIAKVKESALGEEVNKSLTPGQEFLKIVQRELEKAMGEANESLNLATQPPAVILMAGLQGAGKTTSVGKLAKFLRERHKKKVLVVSADVYRPAAIKQLETLAQSVGVDFF 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_BUCAI (Signal recognition particle protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ffh PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.374e-28 Identity = 66/160 (41.25%), Postives = 104/160 (65.00%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLK-KQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 MF LT L + K+ + LT+ENI E +R++R+ALLEADV+L V+++F++ V ++++G + + + P Q+ +KIV+ EL+ MG + L F+ P VIL+ GLQG GKTT AKL ++K K K ++ + D YR AAI+QL IL +Q+ + + Sbjct: 1 MFNNLTQRLSDSLKKILNKGRLTEENIKETIREVRKALLEADVALSVIKKFIENVKKKSIGHEINKSLTPGQEFIKIVKHELIFAMGEKNHSLNFSIEPPAVILVVGLQGSGKTTSLAKLGKWIKNKYKKKILITSTDTYRAAAIEQLKILSDQIEIDFF 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_THEAQ (Signal recognition particle protein OS=Thermus aquaticus GN=ffh PE=1 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28 Identity = 71/158 (44.94%), Postives = 106/158 (67.09%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 MF QL++ L+ A +L+G +T+E++ +R+IRRAL++ADV+L V R FV+ V E+A+G ++ + P + ++ V + L + +GGE + L K R + L GLQG GKTT +AKLA Y K +G+ +LVA D RPAA +QL +LGE+VGVPV Sbjct: 1 MFQQLSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGE-ARLPVLKDR-NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPV 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_METJA (Signal recognition 54 kDa protein OS=Methanocaldococcus jannaschii GN=srp54 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28 Identity = 66/159 (41.51%), Postives = 101/159 (63.52%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 M +L L A NKLK + K+ I E ++DI+RAL++ADV++ +V + + + +A+ +G+ + ++KIV +ELVKL+G E +L + VILL G+QG GKTT +AKLA Y++K+G L+A D YRPAA +QL L E++ VP+Y Sbjct: 1 MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEKTPKGLSKKEHIIKIVYEELVKLLGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIY 159
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_RICFE (Signal recognition particle protein OS=Rickettsia felis GN=ffh PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.289e-28 Identity = 70/158 (44.30%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE--LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV 650 MF LT L ++KL LT+ I MRDIR ALLE+DV+LPV++ F+ V ++A+G +I+ V P Q ++KI+ +E++ L+ SE L P L+ GLQG GKTT S+KLA LK Q K +LV+ D YRPAA +QL IL V + Sbjct: 1 MFKTLTQNLTKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASSESETKLNLNSKPPVNFLMVGLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQLAILANSVQI 158
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_RICPR (Signal recognition particle protein OS=Rickettsia prowazekii GN=ffh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.178e-27 Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGG--EVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV 650 MF LT L ++KL LT+ I MRD+R ALLE+DV+LPV++ F++ V ++A+G +I+ V P Q ++KI+ +E++ L+ ++L P +L+ GLQG GKTT S KLA LK Q K +LV+ D YRPAA +QL I+ V + Sbjct: 1 MFKTLTQNLTKIFDKLVNSGILTENQIDTAMRDVRVALLESDVALPVIKGFIEEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASTESTTKLNLNAKPPVNLLIVGLQGGGKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIIANSVNI 158
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_RICCN (Signal recognition particle protein OS=Rickettsia conorii GN=ffh PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.178e-27 Identity = 69/158 (43.67%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSE--LVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV 650 MF LT L ++KL LT+ I MRDIR ALLE+DV+LPV++ F+ V ++A+G +I+ V P Q ++KI+ +E++ L+ SE L P L+ GLQG GKTT S+KLA L+ Q K +LV+ D YRPAA +QL IL V + Sbjct: 1 MFKTLTQNLTKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLASSKSETKLNLNSKPPVNFLMVGLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAILANSVQI 158
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_RICBR (Signal recognition particle protein OS=Rickettsia bellii (strain RML369-C) GN=ffh PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.010e-27 Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSEL-VFAKSRPTV-ILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGV 650 MF LT L +++L LT+E I +RDIR ALLE+DV+LPV++ FV V ++A+G +I+ V P Q ++KI+ +E++ ++ E+ + ++P V +L+ GLQG GKTT S KLA LK Q K +LV+ D YRPAA +QL IL V + Sbjct: 1 MFKTLTQNLMKIFDRLVSSGLLTEEQIDAALRDIRVALLESDVALPVIKNFVAEVKQKALGQEVIKSVSPGQMIIKIIHEEMINILSSSEDEIKLNLNAKPPVNLLMVGLQGSGKTTASGKLALCLKNQNKKVLLVSLDTYRPAAQEQLEILANSVKI 158 The following BLAST results are available for this feature:
BLAST of CX295252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295252 ID=CX295252; Name=CX295252; organism=Citrus clementina; type=EST; length=670bpback to top |