CX295252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_HELPJ (Cell division protein ftsY homolog OS=Helicobacter pylori J99 GN=ftsY PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 47/148 (31.76%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 222 NKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIA 665 NK+KGEE K+ P ++ L+ D+ ++ ++ + + LI + + L++ VR E + + L ++P V L+ G+ G GKTT AKLA KQ K +L AGD +R AA+ QL + GE++ V V A Sbjct: 10 NKIKGEEVKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGD------LITPKQLEVALLRFVRGESYY----DKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNVQVISA 147
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_BUCBP (Cell division protein ftsY homolog OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsY PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 279 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 DI LL +D+ + R V ++ + V ++ +++I++ ++ K++ L VIL+ G+ GVGKTT+ KLA KK+GKS +L AGD +R AAIDQL + GE V V Sbjct: 128 DIEEQLLVSDIGVRTTRELVDSL----IKVSTQHELKNLNLIIEILKSKMKKILNKVEGPLNINYKNLFVILVVGVNGVGKTTLIGKLAKNYKKKGKSVILAAGDTFRAAAIDQLKLWGEINSVSV 249
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_DICDI (Signal recognition particle 54 kDa protein OS=Dictyostelium discoideum GN=srp54 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 42/150 (28.00%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 177 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQL 623 A++ QL+S L + E T+ E+ + + +++ AL ++DVS+ ++ + + + ++ + G+ + + ++V DEL++L+ V K + +++ GLQG GKTT KLA + KK+G S +V D +R A DQ+ Sbjct: 4 ADLGNQLSSALRSL-----NETTIVNEDTINQLLKEVGNALSKSDVSMSLIIQMRKNIKDKIKLDQMAAGLNKRKIIKQVVFDELIRLLDPGVPLWKPTKGKSNIVMFVGLQGAGKTTSVTKLAYFYKKKGFSTAIVCADTFRAGAFDQV 148
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_GEOCY (Signal recognition particle 54 kDa protein OS=Geodia cydonium GN=SRP54 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 51/150 (34.00%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 228 LKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQ----AVSEQAVGVGLIRGVRPDQQLVKI-VRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L + T+ E +++ M ++I ALLEADV++ +V + Q A+ + +G GL + +++++ V +EL KL+ V K VI+ GLQG GKTT KLA + +K+G LV D +R A DQL + VP Y Sbjct: 15 LPRQRTVINEEVLQAMLKEICTALLEADVNVKLVGKLRQNVRAAIDFEDMGAGLSK-----RRIIQTSVFNELCKLLDPGVPVWHPTKGHSNVIMFVGLQGSGKTTTCTKLAYHYQKKGWKTCLVCADTFRAGAFDQLKQNATKARVPFY 159
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SR541_ARATH (Signal recognition particle 54 kDa protein 1 OS=Arabidopsis thaliana GN=SRP-54A PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.637e-11 Identity = 46/162 (28.40%), Postives = 78/162 (48.15%), Query Frame = 3 Query: 177 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEP-MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 AE+ G++T ++ N T+ E ++ + +I RALL++DVS +V + + + L G + + + EL +++ K++P+V++ GLQG GKTT K A Y +K+G LV D +R A DQL + +P Y Sbjct: 4 AELGGRITRAIQQMNNV-----TIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFY 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_YARLI (Signal recognition particle 54 kDa protein homolog OS=Yarrowia lipolytica GN=SRP54 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = 3 Query: 273 MRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRP-----TVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 ++++ ALLE+DV++ +V + Q V G + + K + DELV L+G + S AK +P V++ GLQG GKTT KLA Y +++G LV D +R A DQL + +P + Sbjct: 31 LKEVCSALLESDVNIKLVSQLRQKVKNSVKATP--NGASKKKVIQKALFDELVNLVGVDESAASAAKFKPQKGKSNVVMFVGLQGSGKTTSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFF 162
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SR541_HORVU (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare GN=SRP54-1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 43/159 (27.04%), Postives = 73/159 (45.91%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 + QL + A ++ + ++ + E + +I RALL++DV +VR + + L G + + + V EL ++ K +P+V++ GLQG GKTT K A Y +++G LV D +R A DQL + +P Y Sbjct: 2 VLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIVNLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTKYAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFY 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_NEIMC (Cell division protein ftsY homolog OS=Neisseria meningitidis serogroup C GN=ftsY PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 279 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 ++ L+ +D+ + ++ V ++ ++G++ +L +++ L L+ LV +++ P VI+LAG+ G GKTT KLA Y + QGKS +L AGD +R AA +QL GE+ V V Sbjct: 157 ELETVLITSDMDMEATEYLMKDVRDRVS----LKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTV 279
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_NEIMB (Cell division protein ftsY homolog OS=Neisseria meningitidis serogroup B GN=ftsY PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 279 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 ++ L+ +D+ + ++ V ++ ++G++ +L +++ L L+ LV +++ P VI+LAG+ G GKTT KLA Y + QGKS +L AGD +R AA +QL GE+ V V Sbjct: 157 ELETVLITSDMGMEATEYLMKDVRDRVS----LKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTV 279
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_NEIMA (Cell division protein ftsY homolog OS=Neisseria meningitidis serogroup A GN=ftsY PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 279 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSR-PTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 ++ L+ +D+ + ++ V ++ ++G++ +L +++ L L+ LV +++ P VI+LAG+ G GKTT KLA Y + QGKS +L AGD +R AA +QL GE+ V V Sbjct: 157 ELETVLITSDMGMEATEYLMKDVRDRVS----LKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTV 279 The following BLAST results are available for this feature:
BLAST of CX295252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295252 ID=CX295252; Name=CX295252; organism=Citrus clementina; type=EST; length=670bpback to top |