CX295252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_UNCMA (Signal recognition 54 kDa protein OS=Uncultured methanogenic archaeon RC-I GN=srp54 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.463e-18 Identity = 51/155 (32.90%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L + L+ A K+ + KE I E ++DI+RA+++ADV++ +V + + +A+ G+ + +++IV ELV ++G + +++ I++ GLQG GKTT SAK+A Y ++G ++ D YRP A DQL L +++GV Y Sbjct: 6 LGTSLKDALRKIANSGKIDKEVIDEVVKDIQRAMIQADVNVKLVMKLSSTIKNRALTEAPPAGMNSKEHVLRIVYTELVNIVGKATPVALQSQT----IMMVGLQGSGKTTTSAKIARYFARKGLKPAVICADTYRPGAYDQLKQLCDKLGVGFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_THEAC (Signal recognition 54 kDa protein OS=Thermoplasma acidophilum GN=srp54 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.200e-17 Identity = 51/154 (33.12%), Postives = 85/154 (55.19%), Query Frame = 3 Query: 198 TSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 ++ L K+ G + KE + E +D++R LL+ADV++ V + + + +A+ G+ +V+I+ +EL+K++G E K +P I+L GL G GKTT + KLA + K+G + L+A DV+R AA DQL + +V Y Sbjct: 7 SASLRETIRKITGSSYIDKETVKEISKDLQRILLKADVNVKTVLQVTKEMERRALEEKPPAGMAHQDYMVRIIYEELLKILG----EPSNVKLKPQTIMLVGLYGNGKTTTAGKLARFFAKKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_NATPD (Signal recognition 54 kDa protein OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=srp54 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.485e-17 Identity = 53/155 (34.19%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L S L +KL+G+ TL+++++ E +++I+R+LL ADV + +V ++ E+A+ G ++KIV +E+V+L+G E I+LAGLQG GKTT +AK+A + K+G ++ D +RP A DQ + E+ V Y Sbjct: 6 LGSSLRGTLDKLQGKTTLSEDDVEEIVKEIQRSLLSADVDVDLVMDLSDSIRERALDEEPPAGTTARDHVLKIVYEEMVELVG----ESTALPLEEQTIVLAGLQGSGKTTTAAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_METTP (Signal recognition 54 kDa protein OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=srp54 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.485e-17 Identity = 52/155 (33.55%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L L A K+ + K + + +RDI+RALL+ADV++ +V + E+A+ G+ P + ++ IV EL+ L+G +++ K I+L GLQG GKTT +AKLA Y +++G ++ D +R A DQL L ++ G+ Y Sbjct: 6 LGGSLRGALKKIASATRVDKALVDDAVRDIQRALLQADVNVKLVMSLSNRIRERALNEKPPAGMNPREHVINIVYQELINLIG-RGTDIPLKKQ---TIMLVGLQGSGKTTTAAKLATYFQRRGLRTAVICADTFRAGAYDQLKALCDRQGIFFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_THEVO (Signal recognition 54 kDa protein OS=Thermoplasma volcanium GN=srp54 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.222e-16 Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L+S L K+ G + K + E +D++R LL+ADV++ V + + +A+ G+ +VKI+ +EL+K++G E + +P I+L GL G GKTT + KL+ + K+G S L+A DV+R AA +QL + E V Y Sbjct: 6 LSSSLRETIRKITGSTYIDKNTVKEISKDLQRILLKADVNVQTVLNITKEMERRALEEKPPVGMAHQDYMVKIIYEELLKILG----EPSNVELKPQTIMLVGLYGHGKTTSAGKLSRFFMKKGLSAGLIAADVHRYAAYEQLQQIAESVNAKFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_HALVO (Signal recognition 54 kDa protein OS=Halobacterium volcanii GN=srp54 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.722e-16 Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L S L + +KL+G+ L ++++ E +++I+R+LL ADV + +V ++ +A+ G ++KIV +ELV L+G E +E+ I+LAGLQG GKTT SAK+A + K+G ++ D +RP A DQ + E+ V Y Sbjct: 6 LGSSLRGSLDKLRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRALEEEPPGGTSARDHVLKIVYEELVDLIG-ESTEIPLESQ---TIMLAGLQGSGKTTTSAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_HALWD (Signal recognition 54 kDa protein OS=Haloquadratum walsbyi (strain DSM 16790) GN=srp54 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L S L + +KL+G+ L ++++ E +++I+R+LL ADV + +V ++ ++A G G +++IV +ELV L+G + ILLAGLQG GKTT +AK+A + +G ++ D +RP A DQ + E+ V Y Sbjct: 6 LGSSLRGSLDKLQGKSRLDEDDVEEIVKEIQRSLLSADVEVSLVMELSSSIEDRATGEEPPAGTSARDHVLRIVYEELVDLVGDSTD----LPLKSQTILLAGLQGSGKTTSAAKMAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_BACSU (Cell division protein ftsY homolog OS=Bacillus subtilis GN=ftsY PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16 Identity = 45/129 (34.88%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 279 DIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGG---EVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 ++ L+ ADV V + + ++ R ++ +++ ++ ++LV++ ++SEL R VILL G+ GVGKTT KLA+ +K++GKS +L AGD +R AI+QL + GE+ GVPV Sbjct: 54 ELEEVLISADVGFTTVMELIDELKKEVKR----RNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPV 178
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_HALLT (Signal recognition 54 kDa protein OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=srp54 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.921e-16 Identity = 52/155 (33.55%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L + L ++ +KL+G+ L++ ++ E +++I+R+LL ADV + +V ++ +A+ G ++KIV +E+V+L+G + +EL ILLAGLQG GKTT +AK+A + K+G ++ D +RP A DQ + E+ V Y Sbjct: 6 LGTSLRSSLDKLQGKSRLSESDVEEIVKEIQRSLLSADVDVSLVMELSDSIKTRALEEEPPGGTTAKDHVLKIVYEEMVELVG-DSTELPLENQ---TILLAGLQGSGKTTSAAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFY 156
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_HALMA (Signal recognition 54 kDa protein OS=Haloarcula marismortui GN=srp54 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.134e-15 Identity = 52/155 (33.55%), Postives = 88/155 (56.77%), Query Frame = 3 Query: 195 LTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 L S L + L+G+ L++E+I + +++I+R+LL+ADV + +V+ ++ +A+ G P +++IV +ELV L+ GE +EL + I+LAGL G GKTT +AK+A + +G ++ D RP A DQ + E+ V Y Sbjct: 6 LGSSLRGTLDDLRGKSRLSEEDIEDIVKEIQRSLLQADVDVGLVQDLSNSIETRALDEEPPAGTTPRDWVLRIVYEELVDLV-GESTELPLEEQ---TIMLAGLYGSGKTTTAAKMAWWFSTKGLRPAIIQTDTDRPGAYDQSKEMAERAEVDFY 156 The following BLAST results are available for this feature:
BLAST of CX295252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295252 ID=CX295252; Name=CX295252; organism=Citrus clementina; type=EST; length=670bpback to top |