CX295252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SR542_ARATH (Signal recognition particle 54 kDa protein 2 OS=Arabidopsis thaliana GN=SRP-54B PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 47/161 (29.19%), Postives = 81/161 (50.31%), Query Frame = 3 Query: 177 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 AE+ G++ S ++ K+ + ++ + + + +I RALL++DVS P+V+ + + L G + + + + EL K++ S K++P V++ GLQG GKTT K A Y +K+G LV D +R A DQL + +P Y Sbjct: 4 AELGGRIMSAIQ----KMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPRVVMFVGLQGSGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKSKIPYY 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_ENTHI (Signal recognition particle 54 kDa protein OS=Entamoeba histolytica PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 45/159 (28.30%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 + QL S L A K+ + +E I +++I +LL DV+ +R+ V + ++ + G+ + + V +EL+ L+ + K + V+++ GLQG GKTT KLA Y K +G +V D +R A +QL + ++ GVP + Sbjct: 2 VLSQLGSSLVTALRKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKINSEDIPDGIDKRKLIKDSVFEELINLVDPKTEAFKPKKGKTCVLMMVGLQGAGKTTTITKLALYYKNRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFF 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_RAT (Signal recognition particle 54 kDa protein OS=Rattus norvegicus GN=Srp54 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 177 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 A++ ++TS L + N T+ E ++ M +++ ALLEADV++ +V++ + V + G+ + + V ELVKL+ V K + VI+ GLQG GKTT +KLA + +++G L+ D +R A DQL + +P Y Sbjct: 4 ADLGRKITSALRSLSNA-----TIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFY 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SRP54_ASPNG (Signal recognition particle 54 kDa protein homolog OS=Aspergillus niger GN=srpA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13 Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 3 Query: 207 LEAAWNKLKGEETLTKENIVEPM-RDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 + AA N L L ++ + M ++I ALL ADV++ +V+ +++ L V + + K V DELV L+ K R VI+ GLQG GKTT KLA + + +G LV D +R A DQL + +P Y Sbjct: 10 INAAVNDLTRSNNLDEKQAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSVNFASLPPAVNKKRLIQKAVFDELVSLVDPHAEPFRPKKGRSNVIMFVGLQGAGKTTTCTKLARHYQMRGFKTALVCADTFRAGAFDQLKQNATKAKIPYY 161
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_HAEIN (Cell division protein ftsY homolog OS=Haemophilus influenzae GN=ftsY PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 42/131 (32.06%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 267 EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSEL-VFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 E ++ LL AD+ +P + ++ ++E A + ++ + L + ++ E+ ++ L + + +P VIL+ G+ GVGKTT KLA + +GKS ML AGD +R AA++QL + GE+ +PV Sbjct: 141 ELFEELEEQLLIADIGVPTTSKIIKNLTEHASR----KELQDAELLYQQLKVEMADILEPVAQPLEIDSTKKPYVILMVGVNGVGKTTTIGKLARKFQAEGKSVMLAAGDTFRAAAVEQLQVWGERNHIPV 267
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_AQUAE (Cell division protein ftsY homolog OS=Aquifex aeolicus GN=ftsY PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 39/130 (30.00%), Postives = 74/130 (56.92%), Query Frame = 3 Query: 267 EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPV 656 E ++ L++ADV + + + ++A+ + ++ +++ ++++ EL +L+ EL + V+L G+ G GKTT KLA+ LK++GK +LVAGD +R AAI+QL + ++ GV + Sbjct: 193 EFFEELEEMLVKADVGVKTAVELTEKLRKEAIR----KNIKEGEKIKELLKKELKELLKNCQGELKIPEKVGAVLLFVGVNGSGKTTTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDI 318
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SR543_ARATH (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana GN=SRP-54C PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 45/161 (27.95%), Postives = 80/161 (49.69%), Query Frame = 3 Query: 177 AEMFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 AE+ G++T ++ ++ + ++ + E + +I RALL++DVS P+V+ + + L G + + + + EL K++ K++ +V++ GLQG GKTT K A Y +K+G LV D +R A DQL + +P Y Sbjct: 4 AELGGRITRAIQ----QMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SR541_SOLLC (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12 Identity = 45/159 (28.30%), Postives = 75/159 (47.17%), Query Frame = 3 Query: 183 MFGQLTSGLEAAWNKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 + QL + A ++ + ++ + E + +I RALL+ADV +VR + + L G + + + V +EL K++ K +P+V++ GLQG GKTT K A + +K+G LV D +R A DQL + +P Y Sbjct: 2 VLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIVNLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTKYAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: SR542_SOLLC (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 49/162 (30.25%), Postives = 78/162 (48.15%), Query Frame = 3 Query: 177 AEMFGQLTSGLEAAWNKLKGEETLTKENIV-EPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVY 659 AE+ G ++ L+ N T+ E ++ E + +I RALL+ADV +VR + + L G + + + V +EL K++ K +P++++ GLQG GKTT K A Y +K+G LV D +R A DQL + +P Y Sbjct: 4 AELGGSISRALQQMSNA-----TIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIVNLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFY 160
BLAST of CX295252 vs. ExPASy Swiss-Prot
Match: FTSY_HELPY (Cell division protein ftsY homolog OS=Helicobacter pylori GN=ftsY PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 47/152 (30.92%), Postives = 74/152 (48.68%), Query Frame = 3 Query: 222 NKLKGEETLTKENIVEPMRDIRRALLEADVSLPVVRRFVQ----AVSEQAVGVGLIRGVRPDQQLVKIVRDELVKLMGGEVSELVFAKSRPTVILLAGLQGVGKTTVSAKLANYLKKQGKSCMLVAGDVYRPAAIDQLVILGEQVGVPVYIA 665 NK+KGEE K+ P ++ L+ D+ ++ ++ ++ + + V L+R VR D K + L ++P V L+ G+ G GKTT AKLA KQ K +L AGD +R AA+ QL + GE++ + V A Sbjct: 10 NKIKGEEAKEKKRQSVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQLEVALLRFVRGDSYYDK--------------TRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNIQVISA 147 The following BLAST results are available for this feature:
BLAST of CX295252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295252 ID=CX295252; Name=CX295252; organism=Citrus clementina; type=EST; length=670bpback to top |