CX295283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.244e-81 Identity = 139/193 (72.02%), Postives = 170/193 (88.08%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGG 608 FIV TL+ TFLSYLL IT+TL +L LLE+KWSGI LEEWWRNEQFW+IGGTSAHLAAVLQGLLKV+AGIEISFTLT+K+ +D DD FA+LY++KWTSL IPP+ ++ +N+IA+ VG+SRT+Y+ IPQ+S+L+GG FFSFWVLAH YPFAKGLMGRRGRTPTIV+VW+GLI+IT+SLLW+ I+PP + GG Sbjct: 817 FIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTIVYVWAGLISITVSLLWITISPPDDSVAQGG 1009
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 4.236e-81 Identity = 144/201 (71.64%), Postives = 170/201 (84.58%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQ---IGGSFQFP 623 FIVQ L++ FL YLLT+T+TL L +LE+KWSGIELE+WWRNEQFWLI GTSAHL AV+QGLLKV+AGIEISFTLT+K+ DD +D +ADLYIVKW+SL+IPPITI MVN+IAIA +RTIYS P+W + +GG FFSFWVLAHL PFAKGLMGRRG+TPTIVFVWSGL++IT+SLLWVAI+PP + GG FQFP Sbjct: 947 FIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAADDNEDIYADLYIVKWSSLLIPPITIGMVNIIAIAFAFARTIYSDNPRWGKFIGGGFFSFWVLAHLNPFAKGLMGRRGKTPTIVFVWSGLLSITVSLLWVAISPPEANSNGGARGGGFQFP 1147
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 2.746e-80 Identity = 148/210 (70.48%), Postives = 171/210 (81.43%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSG---------GDDVDDE-FADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQI--GGSFQFP 623 FIVQ L+ TFL++LL IT+TL +LALLEIKWSGI L EWWRNEQFW+IGGTSAH AAVLQGLLKVIAG++ISFTLTSK G G+ DDE FA+LY V+W+ LM+PP+TIMMVN +AIAV +RT+YS PQWS+L+GG FFSFWVL HLYPFAKGL+GRRGR PTIVFVWSGLI++ ISLLWV INPPAG + GG F FP Sbjct: 1006 FIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKPGNGGGDGGVGGEGNDDEAFAELYEVRWSYLMVPPVTIMMVNAVAIAVAAARTLYSEFPQWSKLLGGAFFSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLISMIISLLWVYINPPAGARERIGGGGFSFP 1215
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.320e-74 Identity = 134/197 (68.02%), Postives = 164/197 (83.25%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKS--GGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGSF 614 F+V+TL +FL YLL IT++L LA+LE+KWSGI LEEWWRNEQFWLIGGTSAHL AVLQG+LKVIAG+EISFTLTSKS GGDD DDEFADLY+ KWT+LMIPP+TI+++N++AI + RT++S PQWS L+GG FF+ WVL H+YPFAKGLMGR G+TPT+V+VWSGLIAI +SLL++ I + GGSF Sbjct: 783 FVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQGILKVIAGVEISFTLTSKSSTGGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAILFAVCRTVFSANPQWSNLLGGTFFASWVLLHMYPFAKGLMGRGGKTPTVVYVWSGLIAICLSLLYITIK---NSEIDGGSF 976
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.466e-57 Identity = 102/195 (52.31%), Postives = 141/195 (72.31%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGSF 614 FI+ ++ + + + +++++ +LE++WSG+ +E+WWRNEQFW+IGGTSAHL AV QGLLKV+AGI+ +FT+TSK+ D D +FA+LYI KWT+L+IPP T+++VNLI I G+S + S W L G +FF+ WV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV INP N +F Sbjct: 882 FIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKA--TDEDGDFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRINPFVDANPNANNF 1074
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.277e-57 Identity = 106/190 (55.79%), Postives = 138/190 (72.63%), Query Frame = 3 Query: 33 IVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQI 602 I + N+ L ++L + ++ A+LE+KWS + LE+WWRNEQFW+IGGTSAHL AV QGLLKV AGI+ +FT+TSK+ D D +FA+LY+ KWTSL+IPP TI++VNL+ I G+S I S W L+G + F+FWV+AHLYPF KGL+GR+ RTPTIV VWS L+A SLLWV INP T + Sbjct: 871 IPEISNLASLCFML-LFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDTNFTVTSKAS--DEDGDFAELYVFKWTSLLIPPTTILLVNLVGIVAGVSYAINSGYQSWGPLMGKLLFAFWVVAHLYPFLKGLLGRQNRTPTIVIVWSALLASIFSLLWVRINPFVSTTGV 1057
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.621e-56 Identity = 98/184 (53.26%), Postives = 138/184 (75.00%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ ++ + + + +++ +LE++WSG+ +EEWWRNEQFW+IGG SAHL AV+QGLLKV+AGI+ +FT+TSK+ GD+ DDEFA+LY KWT+L+IPP T++++N+I + G+S I + W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV +WS L+A SLLWV I+P Sbjct: 856 FIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDE-DDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 1038
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.621e-56 Identity = 98/184 (53.26%), Postives = 138/184 (75.00%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ ++ + + + +++ +LE++WSG+ +EEWWRNEQFW+IGG SAHL AV+QGLLKV+AGI+ +FT+TSK+ GD+ DDEFA+LY KWT+L+IPP T++++N+I + G+S I + W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV +WS L+A SLLWV I+P Sbjct: 856 FIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDE-DDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 1038
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55 Identity = 100/178 (56.18%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 48 NVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 ++ FLS L+I T +LE++WSG+ ++EWWRNEQFW+IGG SAHL AV QG+LKV+AGI+ +FT+TSK+ D D +FA+LY+ KWT+L+IPP T+++VNL+ + G+S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VWS L+A SLLWV I+P Sbjct: 877 SIWFLSLFLSIFAT----GILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKAS--DEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDP 1048
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55 Identity = 98/184 (53.26%), Postives = 134/184 (72.83%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ ++ + + + ++ +LE++WSG+ +E+WWRNEQFW+IGGTSAHL AV QGLLKV+AGI+ +FT+TSK+ D D +FA+LY+ KWTSL+IPP T++++NL+ + G+S I S W L G +FFS WV+ HLYPF KGLMGR+ RTPTIV VWS L+A SLLWV I+P Sbjct: 877 FIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS--DEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDP 1058 The following BLAST results are available for this feature:
BLAST of CX295283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295283 ID=CX295283; Name=CX295283; organism=Citrus clementina; type=EST; length=679bpback to top |