CX295283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55 Identity = 98/184 (53.26%), Postives = 134/184 (72.83%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ ++ + + + ++ +LE++WSG+ +E+WWRNEQFW+IGGTSAHL AV QGLLKV+AGI+ +FT+TSK+ D D +FA+LY+ KWTSL+IPP T++++NL+ + G+S I S W L G +FFS WV+ HLYPF KGLMGR+ RTPTIV VWS L+A SLLWV I+P Sbjct: 877 FIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS--DEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDP 1058
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.811e-55 Identity = 93/184 (50.54%), Postives = 136/184 (73.91%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ ++ + +++ +++ + +LE++WSG+ +EEWWRNEQFW+IGG SAHL AV+QGLLK++AGI+ +FT+TSK+ DD +F +LY KWT+L+IPP T++++N++ + G+S I + W L G +FFSFWV+ HLYPF KGLMGR+ RTPTIV +WS L+A SLLWV I+P Sbjct: 829 FIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD---DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 1009
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.517e-54 Identity = 96/184 (52.17%), Postives = 136/184 (73.91%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ ++ + +++ +++ +LE++WSG+ ++EWWRNEQFW+IGG SAHL AV QGLLKV+AGI+ +FT+TSK+ D D +FA+LY+ KWT+L+IPP TI+++NL+ + G+S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A SLLWV I+P Sbjct: 883 FIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKAS--DEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDP 1064
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.982e-54 Identity = 99/178 (55.62%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 48 NVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 ++ F+S L+I T +LE++WSG+ ++EWWRNEQFW+IGG SAHL AV QGLLKV+AGI+ SFT+TSK+ D + +FA+LY+ KWT+L+IPP TI+++NL+ + G+S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A SLLWV I+P Sbjct: 885 SIWFISLFLSIFAT----GILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKAS--DEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDP 1056
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.982e-54 Identity = 99/178 (55.62%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 48 NVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 ++ F+S L+I T +LE++WSG+ ++EWWRNEQFW+IGG SAHL AV QGLLKV+AGI+ SFT+TSK+ D + +FA+LY+ KWT+L+IPP TI+++NL+ + G+S I S W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A SLLWV I+P Sbjct: 885 SIWFISLFLSIFAT----GILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKAS--DEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDP 1056
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.380e-54 Identity = 92/184 (50.00%), Postives = 134/184 (72.83%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ TLN + + + +++ +LE++WSG+ +E+WWRNEQFW+IGG SAHL AV QGLLKV+ G++ +FT+TSK+ D+ D F +LY+ KWT+L++PP T++++N++ I G+S + + W L G +FFSFWV+ HLYPF KGLMGR+ RTPTIV +WS L+A SL+WV I+P Sbjct: 864 FIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETD-AFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDP 1046
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.835e-54 Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI L + +++ + + + +LE++WSG+ +++WWRNEQFW+IGG S+HL AV QGLLKV+AG++ SFT+TSK+G D+ EF++LY KWT+L+IPP T++++N I + G+S I + W L G +FF+FWV+ HLYPF KGL+GR+ RTPTIV VWS L+A SLLWV I+P Sbjct: 894 FITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDE---EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1074
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53 Identity = 94/190 (49.47%), Postives = 138/190 (72.63%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQ 599 FI+ TL+ + L + +++ + ++LE++WSGI +E+WWRNEQFW+IGG SAHL AV QG+LK+IAG++ +FT+T+K+ D EF +LY+ KWT+++IPP +I+++NL+ + G S + S W L G VFF+ WV+ HLYPF KGLMGR+ RTPTIV +WS L+A SLLWV I+P G+++ Sbjct: 791 FIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDT---EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSE 977
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53 Identity = 94/190 (49.47%), Postives = 138/190 (72.63%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQ 599 FI+ TL+ + L + +++ + ++LE++WSGI +E+WWRNEQFW+IGG SAHL AV QG+LK+IAG++ +FT+T+K+ D EF +LY+ KWT+++IPP +I+++NL+ + G S + S W L G VFF+ WV+ HLYPF KGLMGR+ RTPTIV +WS L+A SLLWV I+P G+++ Sbjct: 791 FIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDT---EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSE 977
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.678e-53 Identity = 97/184 (52.72%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI L + +++ + + +LE++WSG+ +++WWRNEQFW+IGG S+HL AV QGLLKVIAGI+ SFT+TSK GGDD +EF++LY KWT+L+IPP T++++N I + G+S I + W L G +FF+FWV+ HLYPF KGL+GR+ RTPTIV VWS L+A SLLWV I+P Sbjct: 894 FITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSK-GGDD--EEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1074 The following BLAST results are available for this feature:
BLAST of CX295283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295283 ID=CX295283; Name=CX295283; organism=Citrus clementina; type=EST; length=679bpback to top |