CX295283

Overview
NameCX295283
Unique NameCX295283
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 98/184 (53.26%), Postives = 134/184 (72.83%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            FI+  ++     + + +  ++    +LE++WSG+ +E+WWRNEQFW+IGGTSAHL AV QGLLKV+AGI+ +FT+TSK+   D D +FA+LY+ KWTSL+IPP T++++NL+ +  G+S  I S    W  L G +FFS WV+ HLYPF KGLMGR+ RTPTIV VWS L+A   SLLWV I+P
Sbjct:  877 FIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS--DEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDP 1058          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.811e-55
Identity = 93/184 (50.54%), Postives = 136/184 (73.91%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            FI+  ++     + +++ +++ +  +LE++WSG+ +EEWWRNEQFW+IGG SAHL AV+QGLLK++AGI+ +FT+TSK+  DD   +F +LY  KWT+L+IPP T++++N++ +  G+S  I +    W  L G +FFSFWV+ HLYPF KGLMGR+ RTPTIV +WS L+A   SLLWV I+P
Sbjct:  829 FIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD---DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDP 1009          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.517e-54
Identity = 96/184 (52.17%), Postives = 136/184 (73.91%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            FI+  ++     + +++ +++    +LE++WSG+ ++EWWRNEQFW+IGG SAHL AV QGLLKV+AGI+ +FT+TSK+   D D +FA+LY+ KWT+L+IPP TI+++NL+ +  G+S  I S    W  L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A   SLLWV I+P
Sbjct:  883 FIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKAS--DEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDP 1064          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.982e-54
Identity = 99/178 (55.62%), Postives = 133/178 (74.72%), Query Frame = 3
Query:   48 NVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            ++ F+S  L+I  T     +LE++WSG+ ++EWWRNEQFW+IGG SAHL AV QGLLKV+AGI+ SFT+TSK+   D + +FA+LY+ KWT+L+IPP TI+++NL+ +  G+S  I S    W  L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A   SLLWV I+P
Sbjct:  885 SIWFISLFLSIFAT----GILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKAS--DEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDP 1056          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.982e-54
Identity = 99/178 (55.62%), Postives = 133/178 (74.72%), Query Frame = 3
Query:   48 NVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            ++ F+S  L+I  T     +LE++WSG+ ++EWWRNEQFW+IGG SAHL AV QGLLKV+AGI+ SFT+TSK+   D + +FA+LY+ KWT+L+IPP TI+++NL+ +  G+S  I S    W  L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV VW+ L+A   SLLWV I+P
Sbjct:  885 SIWFISLFLSIFAT----GILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKAS--DEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDP 1056          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.380e-54
Identity = 92/184 (50.00%), Postives = 134/184 (72.83%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            FI+ TLN     + + + +++    +LE++WSG+ +E+WWRNEQFW+IGG SAHL AV QGLLKV+ G++ +FT+TSK+  D+ D  F +LY+ KWT+L++PP T++++N++ I  G+S  + +    W  L G +FFSFWV+ HLYPF KGLMGR+ RTPTIV +WS L+A   SL+WV I+P
Sbjct:  864 FIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETD-AFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDP 1046          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.835e-54
Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            FI   L      + +++ + + +  +LE++WSG+ +++WWRNEQFW+IGG S+HL AV QGLLKV+AG++ SFT+TSK+G D+   EF++LY  KWT+L+IPP T++++N I +  G+S  I +    W  L G +FF+FWV+ HLYPF KGL+GR+ RTPTIV VWS L+A   SLLWV I+P
Sbjct:  894 FITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDE---EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1074          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53
Identity = 94/190 (49.47%), Postives = 138/190 (72.63%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQ 599
            FI+ TL+     + L + +++ + ++LE++WSGI +E+WWRNEQFW+IGG SAHL AV QG+LK+IAG++ +FT+T+K+  D    EF +LY+ KWT+++IPP +I+++NL+ +  G S  + S    W  L G VFF+ WV+ HLYPF KGLMGR+ RTPTIV +WS L+A   SLLWV I+P  G+++
Sbjct:  791 FIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDT---EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSE 977          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.284e-53
Identity = 94/190 (49.47%), Postives = 138/190 (72.63%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQ 599
            FI+ TL+     + L + +++ + ++LE++WSGI +E+WWRNEQFW+IGG SAHL AV QG+LK+IAG++ +FT+T+K+  D    EF +LY+ KWT+++IPP +I+++NL+ +  G S  + S    W  L G VFF+ WV+ HLYPF KGLMGR+ RTPTIV +WS L+A   SLLWV I+P  G+++
Sbjct:  791 FIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDT---EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSE 977          
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.678e-53
Identity = 97/184 (52.72%), Postives = 133/184 (72.28%), Query Frame = 3
Query:   30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581
            FI   L      + +++ + +    +LE++WSG+ +++WWRNEQFW+IGG S+HL AV QGLLKVIAGI+ SFT+TSK GGDD  +EF++LY  KWT+L+IPP T++++N I +  G+S  I +    W  L G +FF+FWV+ HLYPF KGL+GR+ RTPTIV VWS L+A   SLLWV I+P
Sbjct:  894 FITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSK-GGDD--EEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1074          
The following BLAST results are available for this feature:
BLAST of CX295283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CESA1_ORYSI5.215e-5553.26Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA7_ARATH6.811e-5550.54Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA8_ORYSJ1.517e-5452.17Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA2_ORYSJ1.982e-5455.62Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI1.982e-5455.62Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA7_ORYSJ3.380e-5450.00Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA6_ORYSJ9.835e-5450.54Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA4_ORYSJ1.284e-5349.47Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI1.284e-5349.47Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA5_ORYSJ1.678e-5352.72Probable cellulose synthase A catalytic subunit 5 ... [more]

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Properties
Property NameValue
Genbank descriptionC05070F01SK PhIFruit1 Citrus clementina cDNA clone C05070F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295283 ID=CX295283; Name=CX295283; organism=Citrus clementina; type=EST; length=679bp
GAGGCCTCGTGCCGAATTCGGCACGAGGGTTCATCGTCCAGACCCTCAAT
GTTACATTCCTTTCCTACCTTCTTACCATCACTGTGACTCTAAGTATACT
AGCTTTGCTTGAAATTAAATGGTCCGGCATTGAATTAGAAGAGTGGTGGA
GAAATGAACAGTTTTGGCTGATTGGAGGCACTAGTGCTCACCTTGCTGCT
GTGCTTCAAGGGCTGCTGAAAGTCATTGCTGGAATTGAAATATCTTTCAC
CTTGACATCGAAATCAGGTGGTGATGATGTGGATGATGAGTTTGCTGATC
TTTACATTGTCAAATGGACATCTCTAATGATACCGCCAATCACAATCATG
ATGGTTAACTTAATTGCAATAGCAGTCGGGTTGAGCAGAACAATTTACAG
TGTTATACCACAATGGAGTCGCTTAGTGGGTGGAGTTTTCTTCAGTTTCT
GGGTTTTGGCCCATCTCTATCCTTTCGCAAAAGGGCTTATGGGAAGAAGA
GGCAGAACACCTACCATTGTTTTTGTATGGTCAGGACTTATCGCAATCAC
CATCTCTCTCCTTTGGGTGGCAATCAATCCTCCAGCTGGTACTAACCAAA
TAGGAGGTTCATTCCAGTTCCCATAATAGGTCATTCTTCTTCTCTTCAGT
TTAATCTTTTTATTGACATTCCTTCATTT
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