CX295283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.678e-53 Identity = 97/184 (52.72%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI L + +++ + + +LE++WSG+ +++WWRNEQFW+IGG S+HL AV QGLLKVIAGI+ SFT+TSK GGDD +EF++LY KWT+L+IPP T++++N I + G+S I + W L G +FF+FWV+ HLYPF KGL+GR+ RTPTIV VWS L+A SLLWV I+P Sbjct: 894 FITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSK-GGDD--EEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1074
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.861e-53 Identity = 96/184 (52.17%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI L + +++ + + +LE++WSG+ +++WWRNEQFW+IGG S+HL A+ QGLLKVIAGI+ SFT+TSK GGDD +EF++LY KWT+L+IPP T++++N I + G+S I + W L G +FF+FWV+ HLYPF KGL+GR+ RTPTIV VWS L+A SLLWV I+P Sbjct: 895 FITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSK-GGDD--EEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1075
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.881e-53 Identity = 93/184 (50.54%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ T+N + L + +++ A+LE++WSG+ + + WRNEQFW+IGG SAHL AV QGLLKV+ G++ +FT+TSK D+ D EF DLY+ KWT+L+IPP T++++N++ + G+S I + W L G +FF+FWV+ HLYPF KGLMGR+ RTPTIV +WS L+A SL+WV I+P Sbjct: 850 FIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEAD-EFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDP 1032
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.422e-52 Identity = 94/184 (51.09%), Postives = 134/184 (72.83%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FI+ TL+ L + +++ + ++LE++WSG+ +E+ WRNEQFW+IGG SAHL AV QG LK++AG++ +FT+TSK+ DD+ EF +LYIVKWT+L+IPP +++++NL+ + G S + W L G VFF+FWV+ HLYPF KGLMGR+ RTPTIV +WS L+A SL+WV INP Sbjct: 786 FIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTA-DDL--EFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNRTPTIVILWSILLASVFSLVWVRINP 966
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.568e-51 Identity = 89/184 (48.37%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FIV ++ + + ++++ +LE++W + +++WWRNEQFW+IGG SAHL A+ QGLLKV+AG+E +FT+TSK+ D EF++LYI KWTSL+IPP T++++N+I + VG+S I + W L G +FF+FWV+ HLYPF KGL+G++ R PTI+ VWS L+A ++LLWV +NP Sbjct: 872 FIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDG---EFSELYIFKWTSLLIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNP 1052
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.736e-50 Identity = 88/184 (47.83%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FIV ++ + + +++I +LE++W + +++WWRNEQFW+IGG SAHL A+ QGLLKV+AG++ +FT+TSK+ D EF+DLY+ KWTSL+IPP+T++++N+I + VG+S I + W L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS L+A ++LLWV +NP Sbjct: 887 FIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDG---EFSDLYLFKWTSLLIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIIVVWSILLASILTLLWVRVNP 1067
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.597e-50 Identity = 88/177 (49.72%), Postives = 128/177 (72.32%), Query Frame = 3 Query: 51 VTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 + FL ++I VT +LE++W I +++WWRNEQFW+IGG S+HL A+ QGLLKV+AG+ +FT+TSK+ D EF++LYI KWTSL+IPP T++++N++ + VG+S I + W L G +FF+ WV+ HLYPF KGL+G++ R PTI+ VWS L+A ++LLWV +NP Sbjct: 901 ILFLLMFMSIAVT----GILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDG---EFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNP 1070
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49 Identity = 83/184 (45.11%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINP 581 FIV ++ + + +++++ +LE++W G+ +++WWRNEQFW+IGG S+HL A+ QGLLKV+AG+ +FT+TSK+ D F++LYI KWT+L+IPP T++++N+I + VG+S I + W L G +FF+ WV+ HLYPF KG++G++ + PTI+ VWS L+A ++LLWV +NP Sbjct: 886 FIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGA---FSELYIFKWTTLLIPPTTLLIINIIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIVHLYPFLKGMLGKQDKMPTIIVVWSILLASILTLLWVRVNP 1066
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.388e-46 Identity = 91/195 (46.67%), Postives = 128/195 (65.64%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSK-SGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGS 611 FIVQ F YL + TL ILA+LE+KW+G+ + EW+RN QFW+ SA+LAAVLQ + KV+ +ISF LTSK GD+ D +ADLY+V+WT LMI PI I++VN+I AV ++ + W ++ GGVFF+FWVL HLYPFAKG++G+ G+TP +V VW + ++L++ I G + G + Sbjct: 736 FIVQRPTTMFYVYLAIVLGTLLILAVLEVKWAGVTVFEWFRNGQFWMTASCSAYLAAVLQVVTKVVFRRDISFKLTSKLPAGDEKKDPYADLYVVRWTWLMITPIIIILVNIIGSAVAFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGKTPVVVLVWWAFTFVITAVLYINIPHIHGPGRHGAA 930
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.928e-33 Identity = 73/189 (38.62%), Postives = 113/189 (59.79%), Query Frame = 3 Query: 57 FLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNL--IAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPP--AGTNQIGGS 611 +L YL+ I + ++ + E+KWSGI + +W RNEQF++IG T + AVL LK+ G I F LTSK D+FADLY V+W L+IP I ++ VN+ + +AVG + + Q V G+ F+ W+LA LYPFA G+MG+RG+ P ++FV + + +++++ A P AG + + S Sbjct: 697 YLLYLVAIIAMIHVIGMFEVKWSGITVLDWCRNEQFYMIGSTGVYPTAVLYMALKLFTGKGIHFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVVLAVNVGAVGVAVGKAAAWGLLTEQGRFAVLGMVFNVWILALLYPFALGIMGQRGKRPAVLFVATVMAVAAVAIMYAAFGAPYQAGLSGVAAS 885 The following BLAST results are available for this feature:
BLAST of CX295283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295283 ID=CX295283; Name=CX295283; organism=Citrus clementina; type=EST; length=679bpback to top |