CX295283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 70/179 (39.11%), Postives = 107/179 (59.78%), Query Frame = 3 Query: 57 FLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIY---SVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPP 584 +L YL+ + + ++ + E+KW+GI L +W RNEQF++IG T + AVL LK++ G I F LTSK D+FADLY V+W L+IP I IM+VN+ A+ V + + P W ++G V F+ W+L LYPFA G+MG+ G+ P ++FV + ++ ++VA P Sbjct: 658 YLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTAASSGDKFADLYTVRWVPLLIPTIVIMVVNVAAVGVAVGKAAAWGPLTEPGWLAVLGMV-FNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYVAFGAP 835
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 71/188 (37.77%), Postives = 110/188 (58.51%), Query Frame = 3 Query: 57 FLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIY---SVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGS 611 +L YL+ + + ++ + E+KW+GI L +W RNEQF++IG T + AVL LK++ G I F LTSK D+FADLY V+W L+IP I I++VN+ A+ V + + P W ++G V F+ W+L LYPFA G+MG+ G+ P ++FV + ++ ++VA P GG+ Sbjct: 688 YLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVIIVVNVAAVGVAVGKAAAWGPLTEPGWLAVLGMV-FNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYVAFGAPYQAELSGGA 874
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.203e-32 Identity = 78/182 (42.86%), Postives = 110/182 (60.44%), Query Frame = 3 Query: 54 TFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDV------DDEFADLYIVKWTSLMIPPITIMMVNL--IAIAVGLSRTIYSVIPQWSRLVGG---VFFSFWVLAHLYPFAKGLMGRRGR-TPTIVFVWSGLIAITISLL 563 T++++L + VTL+ +A+LE +WSGI L EWWRNEQFW++ TSA+LAAV Q LKV G EISF LTSK D ++A+LY V+WT+LM P + VN+ +A A G R + P + V F+ WV+ HLYPFA GLMGRR + I+F+++ + + + L Sbjct: 640 TYVAFLAALMVTLAAVAVLETRWSGIALGEWWRNEQFWMVSATSAYLAAVAQVALKVATGKEISFKLTSKHLASSATPVAGKDRQYAELYAVRWTALMAPTAAALAVNVASMAAAGGGGRWWWWDAPSAAAAAAAALPVAFNVWVVVHLYPFALGLMGRRSKAVRPILFLFAVVAYLAVRFL 821
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 66/186 (35.48%), Postives = 108/186 (58.06%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIE-ISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYS--VIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAIN 578 F +Q T+++YL+ + + ++ L+EIKW+G+ L +WWRNEQF++IG T +LAAVL +LK + G++ + F LT+K + FA+LY V W+ L+ P + +M VN+ AI + + Q + G+ F+ WVL LYPFA G+MGR + P +F ++ +VA++ Sbjct: 666 FHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAKQLAGGARERFAELYDVHWSPLLAPTVVVMAVNVTAIGAAAGKAVVGGWTPAQVAGASAGLVFNVWVLVLLYPFALGIMGRWSKRPCALFALLVAACAAVAAGFVAVH 851
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29 Identity = 66/176 (37.50%), Postives = 110/176 (62.50%), Query Frame = 3 Query: 57 FLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSR-TIYS---VIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVA 572 ++ YLL I + + ++ LEIKW+GI ++WRNEQF++IG TSA+ AVL ++ ++ I F +TSK D +D+FADLY ++W ++IP + +++ N+ AI V + + +Y I Q + G+ F+ WV+ LYPFA +MGR + P I+ V +I + ++L++VA Sbjct: 682 YVVYLLMIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKMAVYMGVWTIAQKRHAIMGLLFNMWVMFLLYPFALAIMGRWAKRPIILVVLLPIIFVIVALVYVA 857
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.915e-29 Identity = 66/176 (37.50%), Postives = 109/176 (61.93%), Query Frame = 3 Query: 57 FLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRT-IYS---VIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVA 572 ++ YLL I + + ++ LEIKW+GI ++WRNEQF++IG TSA+ AVL ++ ++ I F +TSK D +D+FADLY ++W ++IP + +++ N+ AI V + +T +Y I Q G+ F+ WV+ LYPFA +MGR + I+ V +I + ++L++VA Sbjct: 682 YVVYLLVIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKTAVYMGVWTIAQKRHAAMGLLFNMWVMFLLYPFALAIMGRWAKRSIILVVLLPIIFVIVALVYVA 857
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 64/184 (34.78%), Postives = 107/184 (58.15%), Query Frame = 3 Query: 30 FIVQTLNVTFLSYLLTITVTLSILALLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGLSRTIYS--VIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAI 575 F +Q T++ YL+ + ++ ++EIKW+G+ L +W RNEQF++IG T+ + AVL +LK +SF LT+K ++FA+LY V+W L+ P I ++ VN+ AI + + ++ + Q G+ F+ W+L +YPFA G+MGR + P I+FV + + I+L +AI Sbjct: 677 FYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAKQVASSTSEKFAELYDVQWAPLLFPTIVVIAVNICAIGAAIGKALFGGWSLMQMGDASLGLVFNVWILLLIYPFALGIMGRWSKRPYILFVLIVISFVIIALADIAI 860
BLAST of CX295283 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25 Identity = 65/191 (34.03%), Postives = 105/191 (54.97%), Query Frame = 3 Query: 48 NVTFLSYLLTITVTLSILA--LLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTS--------KSGGDDVDDE--FADLYIVKWTSLMIPPITIMMVNL----IAIAVGLSRTIYSVIPQWSRLVGGVFFSFWVLAHLYPFAKGLMGRRGRT-PTIVFVWSGLIAITISLLWV 569 +V++ +L I + S+ A LE++WS + L WWR+E+ W++ TSA LAAV QG+L GI+++F+ + +G DD ++E A ++WT+L++ P ++++ NL A+A G+ Y W L + + WV+AHL F +GL+ R R PTI +WS + SLLWV Sbjct: 654 DVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSASLAAVFQGILSACTGIDVAFSTETAASPPKRPAAGNDDGEEEAALASEITMRWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQ---SWGALGAKLALAGWVVAHLQGFLRGLLAPRDRAPPTIAVLWSVVFVSVASLLWV 841 The following BLAST results are available for this feature:
BLAST of CX295283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295283 ID=CX295283; Name=CX295283; organism=Citrus clementina; type=EST; length=679bpback to top |