CX295303

Overview
NameCX295303
Unique NameCX295303
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.221e-69
Identity = 128/194 (65.98%), Postives = 157/194 (80.93%), Query Frame = 2
Query:   80 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            S+  RE+ VY+AKLAEQAERY+ MV+ MK+VA  D ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+KGN    + IKEYRQK+E EL  IC DI+TV+++HLIP+A++ ES VF+YKMKGDYYRYLAEF  G++++ +A  S++           +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+
Sbjct:    2 STTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACY 195          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.554e-69
Identity = 128/193 (66.32%), Postives = 158/193 (81.87%), Query Frame = 2
Query:   83 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            S  REN VY+AKLAEQAERY+EMV+ MK VA  + +L+VEERNLLSV YKN+IGARRASWRI+SSIEQKEE++GN   A  IKEYR+K+E ELSDIC+D+++V+++HLIP+A+ GES VF+YKMKGDYYRYLAEF  G+  KEAA +S++           +LPPT P+RLGLALNFSVFYYEI++SPE ACH
Sbjct:    2 SNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACH 194          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.641e-69
Identity = 126/189 (66.67%), Postives = 156/189 (82.54%), Query Frame = 2
Query:   95 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            E+ VY+AKLAEQAERY+EMV+ MK VA  D +LTVEERNLLSV YKNVIGARRASWRI++SIEQKEE+KGN      IKEYRQK+E+EL+ IC+DI+ V+D+HLIPSA +GES VF++K+KGDY+RYLAEF  GD +K++A  S++           +LPPTHPIRLGLALNFSVFYYEI+N+P++ACH
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACH 192          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 7.917e-69
Identity = 129/190 (67.89%), Postives = 153/190 (80.53%), Query Frame = 2
Query:   92 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            RE+ VY+AKLAEQAERY+EMV+ MK VA    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEEAKGNE     I++YR K+E+ELS IC DI++V+ +HLI SA  GES VF+YKMKGDY+RYLAEF   +++KEAA  S++           +LPPTHPIRLGLALNFSVFYYEI+NSP+RACH
Sbjct:    5 REDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACH 194          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.753e-68
Identity = 130/198 (65.66%), Postives = 157/198 (79.29%), Query Frame = 2
Query:   74 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            M+S   RE  VY+AKLAEQAERY+EMV+ M+ VAK+    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+E+ELS IC+ I+ +++ HLIPSAS  ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+
Sbjct:    1 MSSESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACN 198          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.753e-68
Identity = 130/192 (67.71%), Postives = 154/192 (80.21%), Query Frame = 2
Query:   92 RENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR K+E+ELS IC+ I+ ++D HL+PS++A ES VF+ KMKGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACN 200          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.493e-67
Identity = 131/192 (68.23%), Postives = 155/192 (80.73%), Query Frame = 2
Query:   92 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACN 199          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.950e-67
Identity = 131/192 (68.23%), Postives = 155/192 (80.73%), Query Frame = 2
Query:   92 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACN 199          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.326e-67
Identity = 130/192 (67.71%), Postives = 157/192 (81.77%), Query Frame = 2
Query:   92 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFG-DEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACH 661
            RE  VY+AKLAEQAERY+EMV+ M+ VAK+DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+E+ELS IC+ I+++++ HL+PSAS  ES VF+ KMKGDY+RYLAEFK G  E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVAKVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACN 196          
BLAST of CX295303 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 5.674e-67
Identity = 129/198 (65.15%), Postives = 154/198 (77.78%), Query Frame = 2
Query:   71 AMASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERAC 658
            A  +   RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IK+YR K+E EL+ IC+ I+ ++D HL+PS++A ES VF+ KMKGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC
Sbjct:    2 AQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRAC 199          
The following BLAST results are available for this feature:
BLAST of CX295303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
RAD24_SCHPO1.221e-6965.98DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
RAD25_SCHPO3.554e-6966.32DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433_TRIHA4.641e-6966.6714-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433_CANAL7.917e-6967.8914-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433_MESCR8.753e-6865.6614-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14335_ORYSJ8.753e-6867.7114-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14336_ORYSJ1.493e-6768.2314-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
1433A_HORVU1.950e-6768.2314-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14331_SOLTU3.326e-6767.7114-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
1433B_HORVU5.674e-6765.1514-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05070G09SK PhIFruit1 Citrus clementina cDNA clone C05070G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295303 ID=CX295303; Name=CX295303; organism=Citrus clementina; type=EST; length=661bp
TTCGGCCGAGGAGAAGACAGAGGAATCTATTGAGACTACAGTAAAACCCT
AATCTCTTCCTCGGAGATCGGCCATGGCTTCCTCTAAAGAACGCGAAAAC
TTCGTCTACGTCGCCAAGCTCGCTGAACAAGCCGAGCGCTACGACGAGAT
GGTGGATGCGATGAAAAATGTTGCGAAGCTTGATGTGGAATTGACGGTTG
AGGAGCGCAACTTGCTCTCTGTTGGCTACAAGAATGTAATTGGTGCTCGA
AGAGCATCGTGGAGGATACTTTCGTCAATTGAGCAAAAGGAAGAAGCGAA
AGGGAATGAAGTGAATGCAAAGCGGATCAAGGAGTATAGGCAAAAGGTTG
AATCTGAATTGTCGGACATTTGCAATGATATCATGACTGTCATTGATGAG
CATCTTATTCCTTCAGCAAGTGCTGGTGAATCAACTGTGTTCTTCTATAA
GATGAAAGGAGATTATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATG
AGAAGAAAGAGGCTGCTGCTAATTCAATGAAAGCATATGAGACAGCTACC
ACTGCTGCAGAGGCTGATTTGCCACCTACACATCCCATCCGATTGGGTTT
GGCTCTGAATTTCTCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAA
GGGCTTGCCAT
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