CX295305
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295305 vs. ExPASy Swiss-Prot
Match: RL18_SULIN (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl18p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11 Identity = 57/219 (26.03%), Postives = 94/219 (42.92%), Query Frame = 3 Query: 90 FQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDAD 743 +++K++RRREGKT+Y R + + + RF+VR TNK +I QI + GD ++A+A++ EL ++ + N +AY TG L A R +K +G E + D+GL + GN+VF IP D + I G H+A Y L + + Y F+ Y+ +G++ + Sbjct: 7 YKIKHRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPE 178
BLAST of CX295305 vs. ExPASy Swiss-Prot
Match: RL18_METAC (50S ribosomal protein L18P OS=Methanosarcina acetivorans GN=rpl18p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.465e-11 Identity = 56/206 (27.18%), Postives = 94/206 (45.63%), Query Frame = 3 Query: 87 RFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQS 704 R++V ++RRREG+T+Y R++L+ ++ R VVR +++++ Q+++ GD ++A ++EL +YG N AAY TGLL LK L+ YEG + LD+GL ++ G+RV+ IP S + F + I G H+A Y D PE++++ Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSRQD-------RVVVRKSSRNVQIQLIAPTPDGDITYSSAVSNELAKYGYTGATGNTTAAYLTGLLFG---LKSLQKG--YEGGI---------------------LDIGLQASSAGSRVYAALKGVVDSGFEIPCSPEVFPPDER-------------IRGEHIAGYREE-SSDLPEQFEA 164 The following BLAST results are available for this feature:
BLAST of CX295305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295305 ID=CX295305; Name=CX295305; organism=Citrus clementina; type=EST; length=744bpback to top |